Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 PCDHB19P-201ENST00000570871 2371 ntBASIC15.73■□□□□ 0.11
NIPAL3Q6P499 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NIPAL3Q6P499 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 LINC02012-201ENST00000608206 1725 ntBASIC15.72■□□□□ 0.11
NIPAL3Q6P499 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 SLC25A1P3-201ENST00000395415 828 ntBASIC15.72■□□□□ 0.11
NIPAL3Q6P499 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 IGHV3-47-201ENST00000425060 335 ntBASIC15.72■□□□□ 0.11
NIPAL3Q6P499 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 AC099336.1-202ENST00000602961 463 ntBASIC15.72■□□□□ 0.11
NIPAL3Q6P499 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 FLJ38576-201ENST00000623820 2459 ntBASIC15.72■□□□□ 0.11
NIPAL3Q6P499 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NIPAL3Q6P499 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 OR6D1P-203ENST00000641209 4860 ntBASIC15.71■□□□□ 0.11
NIPAL3Q6P499 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NIPAL3Q6P499 AC018695.7-201ENST00000624587 2492 ntBASIC15.71■□□□□ 0.1
NIPAL3Q6P499 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NIPAL3Q6P499 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.71■□□□□ 0.1
NIPAL3Q6P499 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
NIPAL3Q6P499 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
NIPAL3Q6P499 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NIPAL3Q6P499 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
NIPAL3Q6P499 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms