Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 FAM220CP-201ENST00000395253 831 ntBASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 AL671277.2-201ENST00000458060 996 ntBASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 RN7SL606P-201ENST00000472779 293 ntBASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 LINC01238-205ENST00000567549 1107 ntBASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 AL138831.2-201ENST00000606564 490 ntBASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
ATP6AP1LQ52LC2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 AC090616.6-201ENST00000582640 721 ntBASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 LINC01023-201ENST00000606054 436 ntBASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP6AP1LQ52LC2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 EGFEM1P-202ENST00000431685 1563 ntBASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 AC022616.7-201ENST00000525383 220 ntBASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 AL353801.3-201ENST00000609898 542 ntBASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 IGHV3-41-201ENST00000613121 348 ntBASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 PCDHB19P-201ENST00000570871 2371 ntBASIC16.68■□□□□ 0.26
ATP6AP1LQ52LC2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms