Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFX7Q2KHR2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 MTDHP5-201ENST00000598980 586 ntBASIC20.74■□□□□ 0.91
RFX7Q2KHR2 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFX7Q2KHR2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RFX7Q2KHR2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RFX7Q2KHR2 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX7Q2KHR2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
RFX7Q2KHR2 PTCHD3P3-201ENST00000403073 906 ntBASIC20.73■□□□□ 0.91
RFX7Q2KHR2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX7Q2KHR2 CRYGEP-201ENST00000412192 528 ntBASIC20.73■□□□□ 0.91
RFX7Q2KHR2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.73■□□□□ 0.91
RFX7Q2KHR2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.73■□□□□ 0.91
RFX7Q2KHR2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RFX7Q2KHR2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.73■□□□□ 0.91
RFX7Q2KHR2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX7Q2KHR2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.73■□□□□ 0.91
RFX7Q2KHR2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RFX7Q2KHR2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX7Q2KHR2 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFX7Q2KHR2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFX7Q2KHR2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.73■□□□□ 0.91
RFX7Q2KHR2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFX7Q2KHR2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX7Q2KHR2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.73■□□□□ 0.91
RFX7Q2KHR2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RFX7Q2KHR2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.73■□□□□ 0.91
RFX7Q2KHR2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX7Q2KHR2 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 DNAJB3-202ENST00000449667 1266 ntBASIC20.72■□□□□ 0.91
RFX7Q2KHR2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 AC060834.1-201ENST00000443027 2032 ntBASIC20.72■□□□□ 0.91
RFX7Q2KHR2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 MRPL20P1-201ENST00000400819 433 ntBASIC20.72■□□□□ 0.91
RFX7Q2KHR2 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 PAWRP1-201ENST00000451083 565 ntBASIC20.72■□□□□ 0.91
RFX7Q2KHR2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 MIR3687-2-201ENST00000577708 61 ntBASIC20.72■□□□□ 0.91
RFX7Q2KHR2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 MIR3687-1-201ENST00000614492 61 ntBASIC20.72■□□□□ 0.91
RFX7Q2KHR2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
RFX7Q2KHR2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX7Q2KHR2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX7Q2KHR2 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.71■□□□□ 0.91
RFX7Q2KHR2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RFX7Q2KHR2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RFX7Q2KHR2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFX7Q2KHR2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.71■□□□□ 0.91
RFX7Q2KHR2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX7Q2KHR2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RFX7Q2KHR2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms