Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDR1Q08345 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDR1Q08345 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
DDR1Q08345 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
DDR1Q08345 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDR1Q08345 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
DDR1Q08345 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
DDR1Q08345 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DDR1Q08345 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
DDR1Q08345 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDR1Q08345 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDR1Q08345 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DDR1Q08345 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DDR1Q08345 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC21.2■□□□□ 0.98
DDR1Q08345 ARSEP1-201ENST00000420443 635 ntBASIC21.2■□□□□ 0.98
DDR1Q08345 U91328.1-201ENST00000437528 223 ntBASIC21.2■□□□□ 0.98
DDR1Q08345 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC21.2■□□□□ 0.98
DDR1Q08345 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC21.2■□□□□ 0.98
DDR1Q08345 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC21.2■□□□□ 0.98
DDR1Q08345 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC21.2■□□□□ 0.98
DDR1Q08345 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC21.2■□□□□ 0.98
DDR1Q08345 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC21.2■□□□□ 0.98
DDR1Q08345 MIR6752-201ENST00000618442 71 ntBASIC21.2■□□□□ 0.98
DDR1Q08345 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DDR1Q08345 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.2■□□□□ 0.98
DDR1Q08345 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDR1Q08345 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
DDR1Q08345 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC21.2■□□□□ 0.98
DDR1Q08345 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
DDR1Q08345 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDR1Q08345 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.19■□□□□ 0.98
DDR1Q08345 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDR1Q08345 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
DDR1Q08345 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
DDR1Q08345 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.19■□□□□ 0.98
DDR1Q08345 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDR1Q08345 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.19■□□□□ 0.98
DDR1Q08345 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDR1Q08345 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
DDR1Q08345 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DDR1Q08345 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
DDR1Q08345 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC21.19■□□□□ 0.98
DDR1Q08345 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDR1Q08345 AC142381.1-201ENST00000426099 345 ntBASIC21.19■□□□□ 0.98
DDR1Q08345 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC21.19■□□□□ 0.98
DDR1Q08345 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC21.19■□□□□ 0.98
DDR1Q08345 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC21.19■□□□□ 0.98
DDR1Q08345 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC21.19■□□□□ 0.98
DDR1Q08345 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC21.19■□□□□ 0.98
DDR1Q08345 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC21.19■□□□□ 0.98
DDR1Q08345 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDR1Q08345 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC21.19■□□□□ 0.98
DDR1Q08345 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
DDR1Q08345 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
DDR1Q08345 NKG7-205ENST00000600427 520 ntTSL 3 BASIC21.19■□□□□ 0.98
DDR1Q08345 AL138828.2-201ENST00000615812 383 ntBASIC21.19■□□□□ 0.98
DDR1Q08345 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDR1Q08345 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDR1Q08345 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
DDR1Q08345 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
DDR1Q08345 LYSMD4-203ENST00000378904 2122 ntBASIC21.19■□□□□ 0.98
DDR1Q08345 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
DDR1Q08345 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDR1Q08345 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.18■□□□□ 0.98
DDR1Q08345 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC21.18■□□□□ 0.98
DDR1Q08345 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.18■□□□□ 0.98
DDR1Q08345 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC21.18■□□□□ 0.98
DDR1Q08345 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC21.18■□□□□ 0.98
DDR1Q08345 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC21.18■□□□□ 0.98
DDR1Q08345 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC21.18■□□□□ 0.98
DDR1Q08345 AC004233.3-201ENST00000607794 1269 ntBASIC21.18■□□□□ 0.98
DDR1Q08345 LINC01451-201ENST00000623792 534 ntBASIC21.18■□□□□ 0.98
DDR1Q08345 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.18■□□□□ 0.98
DDR1Q08345 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDR1Q08345 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
DDR1Q08345 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.18■□□□□ 0.98
DDR1Q08345 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
DDR1Q08345 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
DDR1Q08345 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
DDR1Q08345 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC21.18■□□□□ 0.98
DDR1Q08345 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
DDR1Q08345 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
DDR1Q08345 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDR1Q08345 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC21.17■□□□□ 0.98
DDR1Q08345 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDR1Q08345 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
DDR1Q08345 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.17■□□□□ 0.98
DDR1Q08345 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DDR1Q08345 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDR1Q08345 HCG4-201ENST00000418983 998 ntBASIC21.17■□□□□ 0.98
DDR1Q08345 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC21.17■□□□□ 0.98
DDR1Q08345 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC21.17■□□□□ 0.98
DDR1Q08345 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC21.17■□□□□ 0.98
DDR1Q08345 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC21.17■□□□□ 0.98
DDR1Q08345 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DDR1Q08345 NARF-206ENST00000457415 1668 ntTSL 5 BASIC21.17■□□□□ 0.98
DDR1Q08345 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DDR1Q08345 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDR1Q08345 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDR1Q08345 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms