Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PCDH1Q08174 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH1Q08174 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH1Q08174 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH1Q08174 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDH1Q08174 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDH1Q08174 NUS1P2-201ENST00000417358 873 ntBASIC16.64■□□□□ 0.25
PCDH1Q08174 TSPY19P-201ENST00000418461 509 ntBASIC16.64■□□□□ 0.25
PCDH1Q08174 TSPY18P-201ENST00000441642 509 ntBASIC16.64■□□□□ 0.25
PCDH1Q08174 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH1Q08174 AP001269.4-201ENST00000609611 512 ntBASIC16.64■□□□□ 0.25
PCDH1Q08174 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDH1Q08174 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDH1Q08174 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH1Q08174 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH1Q08174 AD000864.1-201ENST00000624076 2295 ntBASIC16.64■□□□□ 0.25
PCDH1Q08174 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH1Q08174 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDH1Q08174 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH1Q08174 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH1Q08174 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH1Q08174 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH1Q08174 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH1Q08174 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PCDH1Q08174 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
PCDH1Q08174 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH1Q08174 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH1Q08174 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PCDH1Q08174 AC060834.1-201ENST00000443027 2032 ntBASIC16.63■□□□□ 0.25
PCDH1Q08174 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH1Q08174 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDH1Q08174 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDH1Q08174 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PCDH1Q08174 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH1Q08174 AC004817.3-201ENST00000602957 2129 ntBASIC16.63■□□□□ 0.25
PCDH1Q08174 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH1Q08174 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH1Q08174 AC092053.1-201ENST00000605787 1936 ntBASIC16.63■□□□□ 0.25
PCDH1Q08174 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDH1Q08174 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDH1Q08174 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH1Q08174 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PCDH1Q08174 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDH1Q08174 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDH1Q08174 MIR3652-201ENST00000579335 131 ntBASIC16.63■□□□□ 0.25
PCDH1Q08174 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH1Q08174 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH1Q08174 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDH1Q08174 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDH1Q08174 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDH1Q08174 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDH1Q08174 FRMD8P1-201ENST00000440433 1524 ntBASIC16.63■□□□□ 0.25
PCDH1Q08174 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH1Q08174 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH1Q08174 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH1Q08174 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH1Q08174 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH1Q08174 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH1Q08174 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH1Q08174 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH1Q08174 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH1Q08174 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDH1Q08174 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH1Q08174 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PCDH1Q08174 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH1Q08174 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH1Q08174 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH1Q08174 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDH1Q08174 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH1Q08174 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH1Q08174 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH1Q08174 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH1Q08174 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH1Q08174 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH1Q08174 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH1Q08174 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH1Q08174 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH1Q08174 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.62■□□□□ 0.25
PCDH1Q08174 FOSL1P1-201ENST00000511041 816 ntBASIC16.62■□□□□ 0.25
PCDH1Q08174 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.62■□□□□ 0.25
PCDH1Q08174 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.62■□□□□ 0.25
PCDH1Q08174 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.62■□□□□ 0.25
PCDH1Q08174 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH1Q08174 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.62■□□□□ 0.25
PCDH1Q08174 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
PCDH1Q08174 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDH1Q08174 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH1Q08174 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH1Q08174 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDH1Q08174 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PCDH1Q08174 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH1Q08174 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH1Q08174 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH1Q08174 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH1Q08174 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH1Q08174 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH1Q08174 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH1Q08174 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PCDH1Q08174 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDH1Q08174 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms