Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC010947.1-201ENST00000623454 693 ntBASIC19.37■□□□□ 0.69
TPM4P67936 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TPM4P67936 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.37■□□□□ 0.69
TPM4P67936 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPM4P67936 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.37■□□□□ 0.69
TPM4P67936 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPM4P67936 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.37■□□□□ 0.69
TPM4P67936 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPM4P67936 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPM4P67936 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC19.37■□□□□ 0.69
TPM4P67936 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TPM4P67936 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC19.36■□□□□ 0.69
TPM4P67936 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TPM4P67936 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TPM4P67936 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.36■□□□□ 0.69
TPM4P67936 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM4P67936 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.36■□□□□ 0.69
TPM4P67936 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM4P67936 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
TPM4P67936 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM4P67936 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM4P67936 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM4P67936 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.36■□□□□ 0.69
TPM4P67936 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TPM4P67936 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.36■□□□□ 0.69
TPM4P67936 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.36■□□□□ 0.69
TPM4P67936 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TPM4P67936 AC096633.1-201ENST00000422446 749 ntBASIC19.36■□□□□ 0.69
TPM4P67936 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.36■□□□□ 0.69
TPM4P67936 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TPM4P67936 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TPM4P67936 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM4P67936 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TPM4P67936 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM4P67936 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.36■□□□□ 0.69
TPM4P67936 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TPM4P67936 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TPM4P67936 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TPM4P67936 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM4P67936 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM4P67936 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TPM4P67936 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.36■□□□□ 0.69
TPM4P67936 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM4P67936 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.36■□□□□ 0.69
TPM4P67936 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TPM4P67936 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TPM4P67936 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TPM4P67936 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TPM4P67936 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.36■□□□□ 0.69
TPM4P67936 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM4P67936 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM4P67936 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.35■□□□□ 0.69
TPM4P67936 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TPM4P67936 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.35■□□□□ 0.69
TPM4P67936 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.35■□□□□ 0.69
TPM4P67936 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TPM4P67936 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
TPM4P67936 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.35■□□□□ 0.69
TPM4P67936 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.35■□□□□ 0.69
TPM4P67936 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.35■□□□□ 0.69
TPM4P67936 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 MTCL1P1-201ENST00000446207 792 ntBASIC19.35■□□□□ 0.69
TPM4P67936 RASA4DP-201ENST00000460726 1199 ntBASIC19.35■□□□□ 0.69
TPM4P67936 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.35■□□□□ 0.69
TPM4P67936 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.35■□□□□ 0.69
TPM4P67936 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
TPM4P67936 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.35■□□□□ 0.69
TPM4P67936 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.35■□□□□ 0.69
TPM4P67936 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
TPM4P67936 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.35■□□□□ 0.69
TPM4P67936 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 PCDH8P1-201ENST00000428983 2773 ntBASIC19.35■□□□□ 0.69
TPM4P67936 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.35■□□□□ 0.69
TPM4P67936 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TPM4P67936 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
TPM4P67936 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.34■□□□□ 0.69
TPM4P67936 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms