Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 CICP20-201ENST00000443330 2801 ntBASIC12.98□□□□□ -0.33
HIST1H2BCP62807 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 MIR149-201ENST00000384879 89 ntBASIC12.98□□□□□ -0.33
HIST1H2BCP62807 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 AC004817.3-201ENST00000602957 2129 ntBASIC12.98□□□□□ -0.33
HIST1H2BCP62807 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 AC041040.2-201ENST00000622926 2899 ntBASIC12.98□□□□□ -0.33
HIST1H2BCP62807 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H2BCP62807 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 NXN-202ENST00000537628 1340 ntTSL 3 BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 AC073210.2-201ENST00000430369 194 ntBASIC12.97□□□□□ -0.33
HIST1H2BCP62807 UQCRFS1P1-201ENST00000435169 820 ntBASIC12.97□□□□□ -0.33
HIST1H2BCP62807 AC124947.2-201ENST00000547118 1133 ntBASIC12.97□□□□□ -0.33
HIST1H2BCP62807 AC116407.2-201ENST00000613639 860 ntBASIC12.97□□□□□ -0.33
HIST1H2BCP62807 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BCP62807 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H2BCP62807 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.96□□□□□ -0.33
HIST1H2BCP62807 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.96□□□□□ -0.33
HIST1H2BCP62807 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H2BCP62807 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H2BCP62807 AC126755.1-201ENST00000525846 6405 ntBASIC12.96□□□□□ -0.33
HIST1H2BCP62807 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H2BCP62807 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
HIST1H2BCP62807 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.96□□□□□ -0.33
HIST1H2BCP62807 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H2BCP62807 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H2BCP62807 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H2BCP62807 AC132938.6-201ENST00000623828 1655 ntBASIC12.96□□□□□ -0.33
HIST1H2BCP62807 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms