Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 CICP20-201ENST00000443330 2801 ntBASIC12.98□□□□□ -0.33
HIST1H2BDP58876 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 MIR149-201ENST00000384879 89 ntBASIC12.98□□□□□ -0.33
HIST1H2BDP58876 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 AC004817.3-201ENST00000602957 2129 ntBASIC12.98□□□□□ -0.33
HIST1H2BDP58876 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 AC041040.2-201ENST00000622926 2899 ntBASIC12.98□□□□□ -0.33
HIST1H2BDP58876 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.98□□□□□ -0.33
HIST1H2BDP58876 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 NXN-202ENST00000537628 1340 ntTSL 3 BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 AC073210.2-201ENST00000430369 194 ntBASIC12.97□□□□□ -0.33
HIST1H2BDP58876 UQCRFS1P1-201ENST00000435169 820 ntBASIC12.97□□□□□ -0.33
HIST1H2BDP58876 AC124947.2-201ENST00000547118 1133 ntBASIC12.97□□□□□ -0.33
HIST1H2BDP58876 AC116407.2-201ENST00000613639 860 ntBASIC12.97□□□□□ -0.33
HIST1H2BDP58876 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HIST1H2BDP58876 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H2BDP58876 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.96□□□□□ -0.33
HIST1H2BDP58876 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.96□□□□□ -0.33
HIST1H2BDP58876 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H2BDP58876 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H2BDP58876 AC126755.1-201ENST00000525846 6405 ntBASIC12.96□□□□□ -0.33
HIST1H2BDP58876 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H2BDP58876 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
HIST1H2BDP58876 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.96□□□□□ -0.33
HIST1H2BDP58876 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H2BDP58876 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H2BDP58876 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HIST1H2BDP58876 AC132938.6-201ENST00000623828 1655 ntBASIC12.96□□□□□ -0.33
HIST1H2BDP58876 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms