Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL353732.1-201ENST00000569618 1459 ntBASIC20.23■□□□□ 0.83
RHBDL3P58872 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RHBDL3P58872 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.22■□□□□ 0.83
RHBDL3P58872 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RHBDL3P58872 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RHBDL3P58872 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RHBDL3P58872 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.22■□□□□ 0.83
RHBDL3P58872 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RHBDL3P58872 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RHBDL3P58872 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RHBDL3P58872 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
RHBDL3P58872 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RHBDL3P58872 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RHBDL3P58872 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RHBDL3P58872 AL627223.1-201ENST00000416693 442 ntBASIC20.22■□□□□ 0.83
RHBDL3P58872 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.22■□□□□ 0.83
RHBDL3P58872 AL009183.1-201ENST00000603760 355 ntBASIC20.22■□□□□ 0.83
RHBDL3P58872 AC106028.4-201ENST00000614509 607 ntBASIC20.22■□□□□ 0.83
RHBDL3P58872 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.22■□□□□ 0.83
RHBDL3P58872 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RHBDL3P58872 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.22■□□□□ 0.83
RHBDL3P58872 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RHBDL3P58872 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.22■□□□□ 0.83
RHBDL3P58872 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RHBDL3P58872 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
RHBDL3P58872 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RHBDL3P58872 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.22■□□□□ 0.83
RHBDL3P58872 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RHBDL3P58872 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.22■□□□□ 0.83
RHBDL3P58872 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RHBDL3P58872 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RHBDL3P58872 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RHBDL3P58872 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RHBDL3P58872 NOC2LP2-201ENST00000407594 1944 ntBASIC20.21■□□□□ 0.83
RHBDL3P58872 TOP3BP1-201ENST00000420768 1380 ntBASIC20.21■□□□□ 0.83
RHBDL3P58872 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RHBDL3P58872 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RHBDL3P58872 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.21■□□□□ 0.83
RHBDL3P58872 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RHBDL3P58872 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.21■□□□□ 0.83
RHBDL3P58872 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RHBDL3P58872 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RHBDL3P58872 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RHBDL3P58872 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.21■□□□□ 0.83
RHBDL3P58872 AC079140.1-201ENST00000508039 487 ntBASIC20.21■□□□□ 0.83
RHBDL3P58872 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RHBDL3P58872 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.21■□□□□ 0.83
RHBDL3P58872 FAM86C2P-203ENST00000528684 1004 ntBASIC20.21■□□□□ 0.83
RHBDL3P58872 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.21■□□□□ 0.83
RHBDL3P58872 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.21■□□□□ 0.83
RHBDL3P58872 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RHBDL3P58872 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
RHBDL3P58872 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RHBDL3P58872 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RHBDL3P58872 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.21■□□□□ 0.83
RHBDL3P58872 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RHBDL3P58872 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RHBDL3P58872 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RHBDL3P58872 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RHBDL3P58872 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RHBDL3P58872 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RHBDL3P58872 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RHBDL3P58872 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RHBDL3P58872 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RHBDL3P58872 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.83
RHBDL3P58872 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RHBDL3P58872 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.2■□□□□ 0.82
RHBDL3P58872 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RHBDL3P58872 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.2■□□□□ 0.82
RHBDL3P58872 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RHBDL3P58872 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RHBDL3P58872 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
RHBDL3P58872 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RHBDL3P58872 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.2■□□□□ 0.82
RHBDL3P58872 TFAMP1-201ENST00000412727 736 ntBASIC20.2■□□□□ 0.82
RHBDL3P58872 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.2■□□□□ 0.82
RHBDL3P58872 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.2■□□□□ 0.82
RHBDL3P58872 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.2■□□□□ 0.82
RHBDL3P58872 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.2■□□□□ 0.82
RHBDL3P58872 AL135744.1-201ENST00000565098 629 ntBASIC20.2■□□□□ 0.82
RHBDL3P58872 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RHBDL3P58872 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RHBDL3P58872 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RHBDL3P58872 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RHBDL3P58872 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.2■□□□□ 0.82
RHBDL3P58872 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.19■□□□□ 0.82
RHBDL3P58872 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RHBDL3P58872 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.19■□□□□ 0.82
RHBDL3P58872 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.19■□□□□ 0.82
RHBDL3P58872 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RHBDL3P58872 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.19■□□□□ 0.82
RHBDL3P58872 AC092474.2-201ENST00000424288 719 ntBASIC20.19■□□□□ 0.82
RHBDL3P58872 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RHBDL3P58872 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.19■□□□□ 0.82
RHBDL3P58872 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RHBDL3P58872 AC109635.5-201ENST00000533593 962 ntBASIC20.19■□□□□ 0.82
RHBDL3P58872 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.19■□□□□ 0.82
RHBDL3P58872 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.19■□□□□ 0.82
RHBDL3P58872 RARRES2P8-201ENST00000566335 367 ntBASIC20.19■□□□□ 0.82
RHBDL3P58872 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms