Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB38P57729 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB38P57729 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB38P57729 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB38P57729 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB38P57729 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB38P57729 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB38P57729 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB38P57729 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB38P57729 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB38P57729 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB38P57729 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB38P57729 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB38P57729 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RAB38P57729 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB38P57729 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB38P57729 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB38P57729 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB38P57729 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
RAB38P57729 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB38P57729 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RAB38P57729 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RAB38P57729 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB38P57729 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB38P57729 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB38P57729 AP002414.1-201ENST00000391405 1147 ntBASIC16.19■□□□□ 0.18
RAB38P57729 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB38P57729 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
RAB38P57729 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB38P57729 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.19■□□□□ 0.18
RAB38P57729 RPS15P9-201ENST00000494093 319 ntBASIC16.19■□□□□ 0.18
RAB38P57729 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.19■□□□□ 0.18
RAB38P57729 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.19■□□□□ 0.18
RAB38P57729 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB38P57729 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB38P57729 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.19■□□□□ 0.18
RAB38P57729 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB38P57729 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB38P57729 AC116407.3-201ENST00000623905 1129 ntBASIC16.19■□□□□ 0.18
RAB38P57729 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.19■□□□□ 0.18
RAB38P57729 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB38P57729 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB38P57729 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB38P57729 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB38P57729 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB38P57729 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB38P57729 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB38P57729 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB38P57729 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RAB38P57729 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB38P57729 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RAB38P57729 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RAB38P57729 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB38P57729 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB38P57729 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB38P57729 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB38P57729 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB38P57729 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB38P57729 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RAB38P57729 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB38P57729 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB38P57729 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB38P57729 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB38P57729 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB38P57729 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB38P57729 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB38P57729 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB38P57729 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB38P57729 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB38P57729 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB38P57729 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB38P57729 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB38P57729 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB38P57729 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB38P57729 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB38P57729 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.18■□□□□ 0.18
RAB38P57729 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB38P57729 AC079776.4-201ENST00000511039 504 ntBASIC16.18■□□□□ 0.18
RAB38P57729 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAB38P57729 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
RAB38P57729 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.18■□□□□ 0.18
RAB38P57729 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RAB38P57729 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB38P57729 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RAB38P57729 FZD10-202ENST00000539839 3282 ntBASIC16.18■□□□□ 0.18
RAB38P57729 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB38P57729 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB38P57729 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB38P57729 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB38P57729 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB38P57729 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAB38P57729 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB38P57729 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB38P57729 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.18■□□□□ 0.18
RAB38P57729 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.18■□□□□ 0.18
RAB38P57729 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB38P57729 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB38P57729 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB38P57729 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB38P57729 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms