Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKN2DP55273 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN2DP55273 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKN2DP55273 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDKN2DP55273 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDKN2DP55273 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKN2DP55273 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDKN2DP55273 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKN2DP55273 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKN2DP55273 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
CDKN2DP55273 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDKN2DP55273 AC078925.2-201ENST00000624013 1973 ntBASIC17.03■□□□□ 0.32
CDKN2DP55273 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKN2DP55273 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CDKN2DP55273 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
CDKN2DP55273 FOSL1P1-201ENST00000511041 816 ntBASIC17.03■□□□□ 0.32
CDKN2DP55273 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.03■□□□□ 0.32
CDKN2DP55273 AP001269.4-201ENST00000609611 512 ntBASIC17.03■□□□□ 0.32
CDKN2DP55273 AC073592.4-201ENST00000623827 446 ntBASIC17.03■□□□□ 0.32
CDKN2DP55273 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKN2DP55273 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKN2DP55273 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.03■□□□□ 0.32
CDKN2DP55273 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKN2DP55273 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDKN2DP55273 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKN2DP55273 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CDKN2DP55273 SIGLEC16-201ENST00000599858 1437 ntBASIC17.03■□□□□ 0.32
CDKN2DP55273 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKN2DP55273 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CDKN2DP55273 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.02■□□□□ 0.32
CDKN2DP55273 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKN2DP55273 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKN2DP55273 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKN2DP55273 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKN2DP55273 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.02■□□□□ 0.32
CDKN2DP55273 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKN2DP55273 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDKN2DP55273 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKN2DP55273 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKN2DP55273 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CDKN2DP55273 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKN2DP55273 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDKN2DP55273 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.02■□□□□ 0.32
CDKN2DP55273 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKN2DP55273 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDKN2DP55273 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CDKN2DP55273 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CDKN2DP55273 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.02■□□□□ 0.32
CDKN2DP55273 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKN2DP55273 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDKN2DP55273 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDKN2DP55273 KRT16P4-201ENST00000453883 522 ntBASIC17.02■□□□□ 0.32
CDKN2DP55273 AC132008.2-207ENST00000454517 770 ntBASIC17.02■□□□□ 0.32
CDKN2DP55273 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDKN2DP55273 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.02■□□□□ 0.32
CDKN2DP55273 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.02■□□□□ 0.32
CDKN2DP55273 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.02■□□□□ 0.32
CDKN2DP55273 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.02■□□□□ 0.32
CDKN2DP55273 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.02■□□□□ 0.32
CDKN2DP55273 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKN2DP55273 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.02■□□□□ 0.31
CDKN2DP55273 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDKN2DP55273 AC079776.2-201ENST00000641154 1609 ntBASIC17.02■□□□□ 0.31
CDKN2DP55273 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CDKN2DP55273 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDKN2DP55273 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDKN2DP55273 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDKN2DP55273 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CDKN2DP55273 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDKN2DP55273 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDKN2DP55273 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDKN2DP55273 AC097637.2-201ENST00000624096 1997 ntBASIC17.02■□□□□ 0.31
CDKN2DP55273 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDKN2DP55273 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CDKN2DP55273 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDKN2DP55273 PCDHA14-201ENST00000506751 2298 ntBASIC17.01■□□□□ 0.31
CDKN2DP55273 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.01■□□□□ 0.31
CDKN2DP55273 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDKN2DP55273 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDKN2DP55273 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKN2DP55273 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
CDKN2DP55273 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKN2DP55273 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKN2DP55273 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CDKN2DP55273 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDKN2DP55273 ACTG1P4-201ENST00000425123 1122 ntBASIC17.01■□□□□ 0.31
CDKN2DP55273 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDKN2DP55273 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDKN2DP55273 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKN2DP55273 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKN2DP55273 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKN2DP55273 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.01■□□□□ 0.31
CDKN2DP55273 AP005117.1-201ENST00000584346 1413 ntBASIC17.01■□□□□ 0.31
CDKN2DP55273 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.01■□□□□ 0.31
CDKN2DP55273 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.01■□□□□ 0.31
CDKN2DP55273 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDKN2DP55273 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.01■□□□□ 0.31
CDKN2DP55273 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.01■□□□□ 0.31
CDKN2DP55273 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKN2DP55273 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms