Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.01■□□□□ 0.31
LIMK1P53667 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.01■□□□□ 0.31
LIMK1P53667 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LIMK1P53667 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
LIMK1P53667 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
LIMK1P53667 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIMK1P53667 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17■□□□□ 0.31
LIMK1P53667 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIMK1P53667 TUBB3P1-201ENST00000405796 1332 ntBASIC17■□□□□ 0.31
LIMK1P53667 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIMK1P53667 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LIMK1P53667 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17■□□□□ 0.31
LIMK1P53667 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17■□□□□ 0.31
LIMK1P53667 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17■□□□□ 0.31
LIMK1P53667 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17■□□□□ 0.31
LIMK1P53667 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIMK1P53667 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIMK1P53667 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
LIMK1P53667 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIMK1P53667 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17■□□□□ 0.31
LIMK1P53667 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
LIMK1P53667 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17■□□□□ 0.31
LIMK1P53667 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17■□□□□ 0.31
LIMK1P53667 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17■□□□□ 0.31
LIMK1P53667 AC006116.8-202ENST00000587620 1550 ntBASIC17■□□□□ 0.31
LIMK1P53667 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17■□□□□ 0.31
LIMK1P53667 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17■□□□□ 0.31
LIMK1P53667 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIMK1P53667 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17■□□□□ 0.31
LIMK1P53667 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
LIMK1P53667 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LIMK1P53667 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17■□□□□ 0.31
LIMK1P53667 SIRPAP1-201ENST00000448467 1770 ntBASIC17■□□□□ 0.31
LIMK1P53667 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LIMK1P53667 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK1P53667 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK1P53667 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LIMK1P53667 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.99■□□□□ 0.31
LIMK1P53667 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LIMK1P53667 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK1P53667 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
LIMK1P53667 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK1P53667 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.99■□□□□ 0.31
LIMK1P53667 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK1P53667 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK1P53667 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
LIMK1P53667 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK1P53667 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.99■□□□□ 0.31
LIMK1P53667 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
LIMK1P53667 AC005237.2-201ENST00000434368 219 ntBASIC16.99■□□□□ 0.31
LIMK1P53667 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.99■□□□□ 0.31
LIMK1P53667 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.99■□□□□ 0.31
LIMK1P53667 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK1P53667 AP005018.1-201ENST00000525475 301 ntBASIC16.99■□□□□ 0.31
LIMK1P53667 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
LIMK1P53667 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK1P53667 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.99■□□□□ 0.31
LIMK1P53667 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.99■□□□□ 0.31
LIMK1P53667 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.99■□□□□ 0.31
LIMK1P53667 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK1P53667 AC132938.6-201ENST00000623828 1655 ntBASIC16.99■□□□□ 0.31
LIMK1P53667 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
LIMK1P53667 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK1P53667 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.99■□□□□ 0.31
LIMK1P53667 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK1P53667 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK1P53667 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LIMK1P53667 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LIMK1P53667 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.99■□□□□ 0.31
LIMK1P53667 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.99■□□□□ 0.31
LIMK1P53667 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK1P53667 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK1P53667 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
LIMK1P53667 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK1P53667 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK1P53667 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.98■□□□□ 0.31
LIMK1P53667 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK1P53667 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK1P53667 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.98■□□□□ 0.31
LIMK1P53667 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK1P53667 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK1P53667 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.98■□□□□ 0.31
LIMK1P53667 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.98■□□□□ 0.31
LIMK1P53667 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK1P53667 AC107890.1-201ENST00000422478 521 ntBASIC16.98■□□□□ 0.31
LIMK1P53667 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.98■□□□□ 0.31
LIMK1P53667 CRB3P1-201ENST00000449338 276 ntBASIC16.98■□□□□ 0.31
LIMK1P53667 UGT1A2P-201ENST00000454886 866 ntBASIC16.98■□□□□ 0.31
LIMK1P53667 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK1P53667 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK1P53667 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.98■□□□□ 0.31
LIMK1P53667 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.98■□□□□ 0.31
LIMK1P53667 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.98■□□□□ 0.31
LIMK1P53667 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.98■□□□□ 0.31
LIMK1P53667 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.98■□□□□ 0.31
LIMK1P53667 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.98■□□□□ 0.31
LIMK1P53667 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.98■□□□□ 0.31
LIMK1P53667 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LIMK1P53667 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.98■□□□□ 0.31
LIMK1P53667 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms