Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
GPC3P51654 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
GPC3P51654 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.02■□□□□ 0.64
GPC3P51654 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.02■□□□□ 0.64
GPC3P51654 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
GPC3P51654 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.02■□□□□ 0.64
GPC3P51654 AC018845.2-201ENST00000568326 409 ntBASIC19.02■□□□□ 0.64
GPC3P51654 AC055717.3-201ENST00000622967 595 ntBASIC19.02■□□□□ 0.64
GPC3P51654 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GPC3P51654 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
GPC3P51654 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
GPC3P51654 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.02■□□□□ 0.64
GPC3P51654 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.02■□□□□ 0.64
GPC3P51654 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GPC3P51654 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GPC3P51654 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
GPC3P51654 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.02■□□□□ 0.63
GPC3P51654 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
GPC3P51654 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GPC3P51654 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GPC3P51654 LYSMD4-203ENST00000378904 2122 ntBASIC19.01■□□□□ 0.63
GPC3P51654 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.01■□□□□ 0.63
GPC3P51654 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
GPC3P51654 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GPC3P51654 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GPC3P51654 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GPC3P51654 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
GPC3P51654 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.01■□□□□ 0.63
GPC3P51654 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GPC3P51654 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
GPC3P51654 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
GPC3P51654 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.01■□□□□ 0.63
GPC3P51654 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GPC3P51654 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.01■□□□□ 0.63
GPC3P51654 DNAJB3-201ENST00000446806 729 ntBASIC19.01■□□□□ 0.63
GPC3P51654 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GPC3P51654 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.01■□□□□ 0.63
GPC3P51654 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.01■□□□□ 0.63
GPC3P51654 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.01■□□□□ 0.63
GPC3P51654 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.01■□□□□ 0.63
GPC3P51654 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
GPC3P51654 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.01■□□□□ 0.63
GPC3P51654 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
GPC3P51654 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.01■□□□□ 0.63
GPC3P51654 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GPC3P51654 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
GPC3P51654 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GPC3P51654 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
GPC3P51654 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
GPC3P51654 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19■□□□□ 0.63
GPC3P51654 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
GPC3P51654 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GPC3P51654 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GPC3P51654 PI4KAP1-204ENST00000612579 1703 ntBASIC19■□□□□ 0.63
GPC3P51654 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19■□□□□ 0.63
GPC3P51654 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19■□□□□ 0.63
GPC3P51654 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GPC3P51654 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GPC3P51654 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19■□□□□ 0.63
GPC3P51654 AC112482.1-201ENST00000492080 688 ntBASIC19■□□□□ 0.63
GPC3P51654 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19■□□□□ 0.63
GPC3P51654 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19■□□□□ 0.63
GPC3P51654 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GPC3P51654 AC092865.6-201ENST00000642101 219 ntBASIC19■□□□□ 0.63
GPC3P51654 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19■□□□□ 0.63
GPC3P51654 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GPC3P51654 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GPC3P51654 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GPC3P51654 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19■□□□□ 0.63
GPC3P51654 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19■□□□□ 0.63
GPC3P51654 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19■□□□□ 0.63
GPC3P51654 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
GPC3P51654 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GPC3P51654 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GPC3P51654 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GPC3P51654 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.99■□□□□ 0.63
GPC3P51654 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
GPC3P51654 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GPC3P51654 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GPC3P51654 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
GPC3P51654 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.99■□□□□ 0.63
GPC3P51654 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GPC3P51654 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
GPC3P51654 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
GPC3P51654 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
GPC3P51654 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
GPC3P51654 AC002310.6-201ENST00000624451 1377 ntBASIC18.99■□□□□ 0.63
GPC3P51654 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.99■□□□□ 0.63
GPC3P51654 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.99■□□□□ 0.63
GPC3P51654 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.99■□□□□ 0.63
GPC3P51654 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.99■□□□□ 0.63
GPC3P51654 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.99■□□□□ 0.63
GPC3P51654 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.99■□□□□ 0.63
GPC3P51654 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
GPC3P51654 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
GPC3P51654 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.99■□□□□ 0.63
GPC3P51654 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.99■□□□□ 0.63
GPC3P51654 MTDHP5-201ENST00000598980 586 ntBASIC18.99■□□□□ 0.63
GPC3P51654 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GPC3P51654 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms