Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC30.4■■■□□ 2.46
SMARCA4P51532 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SMARCA4P51532 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SMARCA4P51532 AC093503.3-201ENST00000624917 2352 ntBASIC30.39■■■□□ 2.46
SMARCA4P51532 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SMARCA4P51532 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SMARCA4P51532 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SMARCA4P51532 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
SMARCA4P51532 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC30.39■■■□□ 2.46
SMARCA4P51532 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC30.39■■■□□ 2.46
SMARCA4P51532 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
SMARCA4P51532 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
SMARCA4P51532 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
SMARCA4P51532 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SMARCA4P51532 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SMARCA4P51532 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SMARCA4P51532 HLA-H-201ENST00000383620 1096 ntBASIC30.39■■■□□ 2.46
SMARCA4P51532 PRYP6-201ENST00000514804 343 ntBASIC30.39■■■□□ 2.46
SMARCA4P51532 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC30.39■■■□□ 2.46
SMARCA4P51532 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC30.39■■■□□ 2.46
SMARCA4P51532 AC104794.3-201ENST00000566840 1248 ntBASIC30.39■■■□□ 2.46
SMARCA4P51532 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC30.39■■■□□ 2.46
SMARCA4P51532 CYP2A7P1-201ENST00000595391 815 ntBASIC30.39■■■□□ 2.46
SMARCA4P51532 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SMARCA4P51532 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC30.39■■■□□ 2.46
SMARCA4P51532 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SMARCA4P51532 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
SMARCA4P51532 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC30.39■■■□□ 2.45
SMARCA4P51532 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC30.39■■■□□ 2.45
SMARCA4P51532 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
SMARCA4P51532 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
SMARCA4P51532 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC30.38■■■□□ 2.45
SMARCA4P51532 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
SMARCA4P51532 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SMARCA4P51532 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SMARCA4P51532 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SMARCA4P51532 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SMARCA4P51532 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC30.38■■■□□ 2.45
SMARCA4P51532 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC30.38■■■□□ 2.45
SMARCA4P51532 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SMARCA4P51532 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC30.38■■■□□ 2.45
SMARCA4P51532 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC30.38■■■□□ 2.45
SMARCA4P51532 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
SMARCA4P51532 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
SMARCA4P51532 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC30.38■■■□□ 2.45
SMARCA4P51532 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
SMARCA4P51532 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SMARCA4P51532 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC30.38■■■□□ 2.45
SMARCA4P51532 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SMARCA4P51532 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC30.37■■■□□ 2.45
SMARCA4P51532 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC30.37■■■□□ 2.45
SMARCA4P51532 AC087499.5-201ENST00000452760 1342 ntBASIC30.37■■■□□ 2.45
SMARCA4P51532 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC30.37■■■□□ 2.45
SMARCA4P51532 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC30.37■■■□□ 2.45
SMARCA4P51532 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SMARCA4P51532 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SMARCA4P51532 PP14571-201ENST00000404327 934 ntTSL 2 BASIC30.37■■■□□ 2.45
SMARCA4P51532 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SMARCA4P51532 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SMARCA4P51532 ACA64.2-201ENST00000459014 129 ntBASIC30.37■■■□□ 2.45
SMARCA4P51532 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC30.37■■■□□ 2.45
SMARCA4P51532 AC003101.2-201ENST00000612557 442 ntBASIC30.37■■■□□ 2.45
SMARCA4P51532 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC30.37■■■□□ 2.45
SMARCA4P51532 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SMARCA4P51532 AC138969.3-201ENST00000546612 1459 ntBASIC30.37■■■□□ 2.45
SMARCA4P51532 AC138932.2-201ENST00000548268 1459 ntBASIC30.37■■■□□ 2.45
SMARCA4P51532 AC126755.4-201ENST00000549796 1459 ntBASIC30.37■■■□□ 2.45
SMARCA4P51532 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC30.37■■■□□ 2.45
SMARCA4P51532 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SMARCA4P51532 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SMARCA4P51532 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
SMARCA4P51532 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC30.37■■■□□ 2.45
SMARCA4P51532 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC30.37■■■□□ 2.45
SMARCA4P51532 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC30.37■■■□□ 2.45
SMARCA4P51532 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC30.37■■■□□ 2.45
SMARCA4P51532 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
SMARCA4P51532 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC30.36■■■□□ 2.45
SMARCA4P51532 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SMARCA4P51532 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SMARCA4P51532 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SMARCA4P51532 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC30.36■■■□□ 2.45
SMARCA4P51532 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC30.36■■■□□ 2.45
SMARCA4P51532 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SMARCA4P51532 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SMARCA4P51532 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SMARCA4P51532 AL138781.2-201ENST00000617896 1843 ntBASIC30.36■■■□□ 2.45
SMARCA4P51532 CDK2AP2P3-201ENST00000422476 372 ntBASIC30.36■■■□□ 2.45
SMARCA4P51532 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SMARCA4P51532 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC30.36■■■□□ 2.45
SMARCA4P51532 MIR4492-201ENST00000581627 80 ntBASIC30.36■■■□□ 2.45
SMARCA4P51532 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC30.36■■■□□ 2.45
SMARCA4P51532 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SMARCA4P51532 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC30.36■■■□□ 2.45
SMARCA4P51532 LINC00896-202ENST00000609602 2128 ntBASIC30.36■■■□□ 2.45
SMARCA4P51532 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC30.35■■■□□ 2.45
SMARCA4P51532 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SMARCA4P51532 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
SMARCA4P51532 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC30.35■■■□□ 2.45
SMARCA4P51532 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC30.35■■■□□ 2.45
SMARCA4P51532 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms