Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AKAP8P1-201ENST00000434743 1349 ntBASIC18.98■□□□□ 0.63
CDK7P50613 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDK7P50613 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.98■□□□□ 0.63
CDK7P50613 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDK7P50613 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDK7P50613 AC046185.3-201ENST00000623228 1824 ntBASIC18.97■□□□□ 0.63
CDK7P50613 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.97■□□□□ 0.63
CDK7P50613 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.97■□□□□ 0.63
CDK7P50613 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK7P50613 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CDK7P50613 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK7P50613 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK7P50613 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CDK7P50613 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK7P50613 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.97■□□□□ 0.63
CDK7P50613 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.97■□□□□ 0.63
CDK7P50613 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK7P50613 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDK7P50613 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDK7P50613 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDK7P50613 MIR943-201ENST00000401286 94 ntBASIC18.97■□□□□ 0.63
CDK7P50613 KRT18P32-201ENST00000424695 1287 ntBASIC18.97■□□□□ 0.63
CDK7P50613 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK7P50613 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.97■□□□□ 0.63
CDK7P50613 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
CDK7P50613 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.97■□□□□ 0.63
CDK7P50613 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.97■□□□□ 0.63
CDK7P50613 AC087641.1-201ENST00000557561 1021 ntBASIC18.97■□□□□ 0.63
CDK7P50613 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CDK7P50613 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.97■□□□□ 0.63
CDK7P50613 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.97■□□□□ 0.63
CDK7P50613 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK7P50613 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK7P50613 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK7P50613 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK7P50613 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK7P50613 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.97■□□□□ 0.63
CDK7P50613 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK7P50613 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.97■□□□□ 0.63
CDK7P50613 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK7P50613 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.97■□□□□ 0.63
CDK7P50613 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK7P50613 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDK7P50613 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDK7P50613 AP000997.3-201ENST00000623333 2250 ntBASIC18.97■□□□□ 0.63
CDK7P50613 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDK7P50613 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDK7P50613 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDK7P50613 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDK7P50613 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.96■□□□□ 0.63
CDK7P50613 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDK7P50613 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDK7P50613 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDK7P50613 PCDHB18P-201ENST00000524813 2368 ntBASIC18.96■□□□□ 0.63
CDK7P50613 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDK7P50613 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.96■□□□□ 0.63
CDK7P50613 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.96■□□□□ 0.63
CDK7P50613 KLF2P3-201ENST00000451977 1087 ntBASIC18.96■□□□□ 0.63
CDK7P50613 UGT1A2P-201ENST00000454886 866 ntBASIC18.96■□□□□ 0.63
CDK7P50613 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CDK7P50613 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.96■□□□□ 0.63
CDK7P50613 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.96■□□□□ 0.63
CDK7P50613 LINC01225-203ENST00000563550 1244 ntBASIC18.96■□□□□ 0.63
CDK7P50613 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDK7P50613 AL135744.1-201ENST00000565098 629 ntBASIC18.96■□□□□ 0.63
CDK7P50613 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.96■□□□□ 0.63
CDK7P50613 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.96■□□□□ 0.63
CDK7P50613 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.96■□□□□ 0.63
CDK7P50613 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDK7P50613 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.96■□□□□ 0.63
CDK7P50613 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDK7P50613 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CDK7P50613 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.96■□□□□ 0.63
CDK7P50613 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CDK7P50613 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.96■□□□□ 0.63
CDK7P50613 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDK7P50613 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CDK7P50613 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDK7P50613 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
CDK7P50613 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CDK7P50613 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.95■□□□□ 0.62
CDK7P50613 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.95■□□□□ 0.62
CDK7P50613 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.95■□□□□ 0.62
CDK7P50613 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.95■□□□□ 0.62
CDK7P50613 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDK7P50613 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
CDK7P50613 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDK7P50613 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDK7P50613 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDK7P50613 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDK7P50613 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.95■□□□□ 0.62
CDK7P50613 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CDK7P50613 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
CDK7P50613 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDK7P50613 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDK7P50613 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
CDK7P50613 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.95■□□□□ 0.62
CDK7P50613 TERF1P3-201ENST00000505638 1227 ntBASIC18.95■□□□□ 0.62
CDK7P50613 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.95■□□□□ 0.62
CDK7P50613 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms