Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPAP49450 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CENPAP49450 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CENPAP49450 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.69■□□□□ 0.1
CENPAP49450 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CENPAP49450 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.69■□□□□ 0.1
CENPAP49450 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CENPAP49450 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPAP49450 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.69■□□□□ 0.1
CENPAP49450 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.69■□□□□ 0.1
CENPAP49450 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.69■□□□□ 0.1
CENPAP49450 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CENPAP49450 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.68■□□□□ 0.1
CENPAP49450 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.68■□□□□ 0.1
CENPAP49450 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CENPAP49450 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.68■□□□□ 0.1
CENPAP49450 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CENPAP49450 AL671277.2-201ENST00000458060 996 ntBASIC15.68■□□□□ 0.1
CENPAP49450 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.68■□□□□ 0.1
CENPAP49450 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.68■□□□□ 0.1
CENPAP49450 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.68■□□□□ 0.1
CENPAP49450 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.68■□□□□ 0.1
CENPAP49450 AL390719.2-201ENST00000606993 987 ntBASIC15.68■□□□□ 0.1
CENPAP49450 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.68■□□□□ 0.1
CENPAP49450 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.68■□□□□ 0.1
CENPAP49450 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CENPAP49450 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
CENPAP49450 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.68■□□□□ 0.1
CENPAP49450 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CENPAP49450 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CENPAP49450 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.68■□□□□ 0.1
CENPAP49450 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.68■□□□□ 0.1
CENPAP49450 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.68■□□□□ 0.1
CENPAP49450 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CENPAP49450 AD000864.1-201ENST00000624076 2295 ntBASIC15.68■□□□□ 0.1
CENPAP49450 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CENPAP49450 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CENPAP49450 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPAP49450 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CENPAP49450 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPAP49450 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CENPAP49450 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.67■□□□□ 0.1
CENPAP49450 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
CENPAP49450 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CENPAP49450 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPAP49450 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CENPAP49450 AC009053.2-201ENST00000563701 2365 ntBASIC15.67■□□□□ 0.1
CENPAP49450 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CENPAP49450 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.67■□□□□ 0.1
CENPAP49450 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CENPAP49450 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPAP49450 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.67■□□□□ 0.1
CENPAP49450 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPAP49450 MYCLP1-201ENST00000372451 1075 ntBASIC15.67■□□□□ 0.1
CENPAP49450 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.67■□□□□ 0.1
CENPAP49450 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.67■□□□□ 0.1
CENPAP49450 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.67■□□□□ 0.1
CENPAP49450 GUSBP12-201ENST00000513727 720 ntBASIC15.67■□□□□ 0.1
CENPAP49450 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CENPAP49450 RN7SL850P-201ENST00000579959 291 ntBASIC15.67■□□□□ 0.1
CENPAP49450 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.67■□□□□ 0.1
CENPAP49450 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.67■□□□□ 0.1
CENPAP49450 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.67■□□□□ 0.1
CENPAP49450 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.67■□□□□ 0.1
CENPAP49450 HYMAI.1-201ENST00000620949 238 ntBASIC15.67■□□□□ 0.1
CENPAP49450 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPAP49450 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CENPAP49450 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPAP49450 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.67■□□□□ 0.1
CENPAP49450 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CENPAP49450 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPAP49450 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.67■□□□□ 0.1
CENPAP49450 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPAP49450 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPAP49450 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms