Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TM4SF4P48230 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF4P48230 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF4P48230 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF4P48230 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF4P48230 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF4P48230 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC19.41■□□□□ 0.7
TM4SF4P48230 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF4P48230 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19.41■□□□□ 0.7
TM4SF4P48230 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TM4SF4P48230 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.41■□□□□ 0.7
TM4SF4P48230 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC19.41■□□□□ 0.7
TM4SF4P48230 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
TM4SF4P48230 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.41■□□□□ 0.7
TM4SF4P48230 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.41■□□□□ 0.7
TM4SF4P48230 MIR4259-201ENST00000584466 101 ntBASIC19.41■□□□□ 0.7
TM4SF4P48230 AC008494.3-201ENST00000606615 944 ntBASIC19.41■□□□□ 0.7
TM4SF4P48230 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.41■□□□□ 0.7
TM4SF4P48230 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.41■□□□□ 0.7
TM4SF4P48230 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM4SF4P48230 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF4P48230 AL023806.1-201ENST00000603994 1649 ntBASIC19.4■□□□□ 0.7
TM4SF4P48230 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.4■□□□□ 0.7
TM4SF4P48230 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF4P48230 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.4■□□□□ 0.7
TM4SF4P48230 AIRN-201ENST00000601203 4374 ntBASIC19.4■□□□□ 0.7
TM4SF4P48230 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF4P48230 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.4■□□□□ 0.7
TM4SF4P48230 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TM4SF4P48230 HLA-H-201ENST00000383620 1096 ntBASIC19.4■□□□□ 0.7
TM4SF4P48230 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
TM4SF4P48230 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.4■□□□□ 0.7
TM4SF4P48230 AL353705.2-201ENST00000428243 662 ntBASIC19.4■□□□□ 0.7
TM4SF4P48230 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF4P48230 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF4P48230 PACS1-203ENST00000524815 628 ntTSL 4 BASIC19.4■□□□□ 0.7
TM4SF4P48230 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF4P48230 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TM4SF4P48230 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
TM4SF4P48230 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
TM4SF4P48230 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.4■□□□□ 0.7
TM4SF4P48230 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.4■□□□□ 0.7
TM4SF4P48230 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF4P48230 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.4■□□□□ 0.7
TM4SF4P48230 LINC01451-201ENST00000623792 534 ntBASIC19.4■□□□□ 0.7
TM4SF4P48230 AP001350.2-201ENST00000625104 1094 ntBASIC19.4■□□□□ 0.7
TM4SF4P48230 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TM4SF4P48230 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF4P48230 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.4■□□□□ 0.7
TM4SF4P48230 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.4■□□□□ 0.7
TM4SF4P48230 TOP3BP1-201ENST00000420768 1380 ntBASIC19.4■□□□□ 0.7
TM4SF4P48230 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TM4SF4P48230 REXO1L9P-201ENST00000604264 2108 ntBASIC19.4■□□□□ 0.7
TM4SF4P48230 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF4P48230 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.4■□□□□ 0.7
TM4SF4P48230 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF4P48230 FOXO1B-201ENST00000504678 1527 ntBASIC19.4■□□□□ 0.7
TM4SF4P48230 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF4P48230 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TM4SF4P48230 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.4■□□□□ 0.7
TM4SF4P48230 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.39■□□□□ 0.7
TM4SF4P48230 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.39■□□□□ 0.7
TM4SF4P48230 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TM4SF4P48230 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.39■□□□□ 0.7
TM4SF4P48230 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
TM4SF4P48230 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.39■□□□□ 0.7
TM4SF4P48230 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TM4SF4P48230 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TM4SF4P48230 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TM4SF4P48230 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TM4SF4P48230 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC19.39■□□□□ 0.69
TM4SF4P48230 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.39■□□□□ 0.69
TM4SF4P48230 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC19.39■□□□□ 0.69
TM4SF4P48230 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TM4SF4P48230 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TM4SF4P48230 AC093004.1-201ENST00000508850 424 ntBASIC19.39■□□□□ 0.69
TM4SF4P48230 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.39■□□□□ 0.69
TM4SF4P48230 MIR4525-201ENST00000580000 75 ntBASIC19.39■□□□□ 0.69
TM4SF4P48230 AL512343.1-201ENST00000605837 169 ntBASIC19.39■□□□□ 0.69
TM4SF4P48230 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TM4SF4P48230 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
TM4SF4P48230 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TM4SF4P48230 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.39■□□□□ 0.69
TM4SF4P48230 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.39■□□□□ 0.69
TM4SF4P48230 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
TM4SF4P48230 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TM4SF4P48230 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TM4SF4P48230 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.38■□□□□ 0.69
TM4SF4P48230 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF4P48230 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF4P48230 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF4P48230 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF4P48230 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF4P48230 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF4P48230 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF4P48230 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF4P48230 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TM4SF4P48230 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.38■□□□□ 0.69
TM4SF4P48230 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF4P48230 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms