Protein–RNA interactions for Protein: P48163

ME1, NADP-dependent malic enzyme, humanhuman

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ME1P48163 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ME1P48163 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ME1P48163 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ME1P48163 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.76■□□□□ 0.75
ME1P48163 AC091607.1-201ENST00000490318 1060 ntBASIC19.76■□□□□ 0.75
ME1P48163 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.76■□□□□ 0.75
ME1P48163 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ME1P48163 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.76■□□□□ 0.75
ME1P48163 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.76■□□□□ 0.75
ME1P48163 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.76■□□□□ 0.75
ME1P48163 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ME1P48163 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ME1P48163 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ME1P48163 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ME1P48163 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.76■□□□□ 0.75
ME1P48163 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
ME1P48163 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ME1P48163 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ME1P48163 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ME1P48163 PCDHB19P-201ENST00000570871 2371 ntBASIC19.76■□□□□ 0.75
ME1P48163 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ME1P48163 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
ME1P48163 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ME1P48163 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ME1P48163 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ME1P48163 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ME1P48163 AL135999.2-201ENST00000622438 1686 ntBASIC19.75■□□□□ 0.75
ME1P48163 EGFEM1P-202ENST00000431685 1563 ntBASIC19.75■□□□□ 0.75
ME1P48163 AL353593.2-201ENST00000602529 1483 ntBASIC19.75■□□□□ 0.75
ME1P48163 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
ME1P48163 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ME1P48163 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.75■□□□□ 0.75
ME1P48163 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ME1P48163 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ME1P48163 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.75■□□□□ 0.75
ME1P48163 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.75■□□□□ 0.75
ME1P48163 AC246785.2-201ENST00000432512 513 ntBASIC19.75■□□□□ 0.75
ME1P48163 VENTXP7-201ENST00000475503 772 ntBASIC19.75■□□□□ 0.75
ME1P48163 AC009533.2-201ENST00000543664 586 ntBASIC19.75■□□□□ 0.75
ME1P48163 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
ME1P48163 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ME1P48163 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.75■□□□□ 0.75
ME1P48163 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ME1P48163 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ME1P48163 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ME1P48163 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ME1P48163 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ME1P48163 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ME1P48163 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ME1P48163 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ME1P48163 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ME1P48163 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ME1P48163 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ME1P48163 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.75■□□□□ 0.75
ME1P48163 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ME1P48163 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.75■□□□□ 0.75
ME1P48163 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.74■□□□□ 0.75
ME1P48163 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ME1P48163 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ME1P48163 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ME1P48163 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ME1P48163 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ME1P48163 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.74■□□□□ 0.75
ME1P48163 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ME1P48163 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.74■□□□□ 0.75
ME1P48163 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ME1P48163 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ME1P48163 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.74■□□□□ 0.75
ME1P48163 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ME1P48163 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ME1P48163 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.74■□□□□ 0.75
ME1P48163 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.74■□□□□ 0.75
ME1P48163 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.74■□□□□ 0.75
ME1P48163 BX276092.5-203ENST00000456199 560 ntBASIC19.74■□□□□ 0.75
ME1P48163 STK19B-204ENST00000512515 211 ntBASIC19.74■□□□□ 0.75
ME1P48163 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.74■□□□□ 0.75
ME1P48163 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.74■□□□□ 0.75
ME1P48163 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
ME1P48163 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.74■□□□□ 0.75
ME1P48163 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.74■□□□□ 0.75
ME1P48163 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ME1P48163 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ME1P48163 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
ME1P48163 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ME1P48163 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
ME1P48163 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ME1P48163 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.74■□□□□ 0.75
ME1P48163 AC009336.1-201ENST00000608941 1553 ntBASIC19.74■□□□□ 0.75
ME1P48163 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.74■□□□□ 0.75
ME1P48163 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ME1P48163 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ME1P48163 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ME1P48163 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ME1P48163 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ME1P48163 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
ME1P48163 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ME1P48163 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ME1P48163 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ME1P48163 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.73■□□□□ 0.75
ME1P48163 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms