Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CBX5P45973 AC008741.2-201ENST00000612792 3115 ntBASIC14.91□□□□□ -0.02
CBX5P45973 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.91□□□□□ -0.02
CBX5P45973 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CBX5P45973 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CBX5P45973 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.91□□□□□ -0.02
CBX5P45973 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.91□□□□□ -0.02
CBX5P45973 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CBX5P45973 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CBX5P45973 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CBX5P45973 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CBX5P45973 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CBX5P45973 LYSMD4-203ENST00000378904 2122 ntBASIC14.91□□□□□ -0.02
CBX5P45973 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.91□□□□□ -0.02
CBX5P45973 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CBX5P45973 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
CBX5P45973 PVRIG2P-201ENST00000435460 978 ntBASIC14.91□□□□□ -0.02
CBX5P45973 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.91□□□□□ -0.02
CBX5P45973 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.91□□□□□ -0.02
CBX5P45973 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CBX5P45973 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.91□□□□□ -0.02
CBX5P45973 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.91□□□□□ -0.02
CBX5P45973 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
CBX5P45973 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.91□□□□□ -0.02
CBX5P45973 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CBX5P45973 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.91□□□□□ -0.02
CBX5P45973 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CBX5P45973 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CBX5P45973 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CBX5P45973 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.91□□□□□ -0.02
CBX5P45973 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
CBX5P45973 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CBX5P45973 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CBX5P45973 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.91□□□□□ -0.02
CBX5P45973 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CBX5P45973 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.91□□□□□ -0.02
CBX5P45973 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CBX5P45973 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CBX5P45973 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CBX5P45973 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CBX5P45973 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.9□□□□□ -0.02
CBX5P45973 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
CBX5P45973 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CBX5P45973 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CBX5P45973 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CBX5P45973 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CBX5P45973 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.9□□□□□ -0.02
CBX5P45973 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.9□□□□□ -0.02
CBX5P45973 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.9□□□□□ -0.02
CBX5P45973 AC012618.2-201ENST00000428058 849 ntBASIC14.9□□□□□ -0.02
CBX5P45973 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.9□□□□□ -0.02
CBX5P45973 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CBX5P45973 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.9□□□□□ -0.02
CBX5P45973 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CBX5P45973 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.9□□□□□ -0.02
CBX5P45973 MIR3917-201ENST00000580971 93 ntBASIC14.9□□□□□ -0.02
CBX5P45973 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CBX5P45973 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CBX5P45973 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.9□□□□□ -0.02
CBX5P45973 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CBX5P45973 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CBX5P45973 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CBX5P45973 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CBX5P45973 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
CBX5P45973 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.9□□□□□ -0.02
CBX5P45973 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.9□□□□□ -0.02
CBX5P45973 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CBX5P45973 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CBX5P45973 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CBX5P45973 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CBX5P45973 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CBX5P45973 PCDHB19P-201ENST00000570871 2371 ntBASIC14.9□□□□□ -0.02
CBX5P45973 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CBX5P45973 AC060834.1-201ENST00000443027 2032 ntBASIC14.9□□□□□ -0.02
CBX5P45973 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CBX5P45973 PCDHA14-201ENST00000506751 2298 ntBASIC14.9□□□□□ -0.02
CBX5P45973 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.9□□□□□ -0.02
CBX5P45973 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CBX5P45973 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CBX5P45973 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CBX5P45973 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.9□□□□□ -0.02
CBX5P45973 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CBX5P45973 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CBX5P45973 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CBX5P45973 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.89□□□□□ -0.03
CBX5P45973 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CBX5P45973 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.89□□□□□ -0.03
CBX5P45973 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CBX5P45973 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CBX5P45973 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.89□□□□□ -0.03
CBX5P45973 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.89□□□□□ -0.03
CBX5P45973 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CBX5P45973 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CBX5P45973 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CBX5P45973 DOC2GP-204ENST00000639052 2548 ntBASIC14.89□□□□□ -0.03
CBX5P45973 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CBX5P45973 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.89□□□□□ -0.03
CBX5P45973 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CBX5P45973 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.89□□□□□ -0.03
CBX5P45973 UNC93B2-201ENST00000285383 730 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms