Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6BP35913 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6BP35913 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.07■□□□□ 0.96
PDE6BP35913 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PDE6BP35913 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDE6BP35913 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
PDE6BP35913 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PDE6BP35913 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDE6BP35913 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PDE6BP35913 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDE6BP35913 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.06■□□□□ 0.96
PDE6BP35913 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.06■□□□□ 0.96
PDE6BP35913 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.06■□□□□ 0.96
PDE6BP35913 MRPS18AP1-201ENST00000414458 589 ntBASIC21.06■□□□□ 0.96
PDE6BP35913 NME2P1-201ENST00000426182 414 ntBASIC21.06■□□□□ 0.96
PDE6BP35913 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC21.06■□□□□ 0.96
PDE6BP35913 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC21.06■□□□□ 0.96
PDE6BP35913 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PDE6BP35913 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC21.06■□□□□ 0.96
PDE6BP35913 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC21.06■□□□□ 0.96
PDE6BP35913 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC21.06■□□□□ 0.96
PDE6BP35913 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC21.06■□□□□ 0.96
PDE6BP35913 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.06■□□□□ 0.96
PDE6BP35913 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDE6BP35913 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PDE6BP35913 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.06■□□□□ 0.96
PDE6BP35913 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
PDE6BP35913 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.05■□□□□ 0.96
PDE6BP35913 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.05■□□□□ 0.96
PDE6BP35913 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDE6BP35913 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDE6BP35913 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDE6BP35913 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.05■□□□□ 0.96
PDE6BP35913 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDE6BP35913 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDE6BP35913 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PDE6BP35913 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PDE6BP35913 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
PDE6BP35913 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDE6BP35913 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC21.05■□□□□ 0.96
PDE6BP35913 AC007274.1-201ENST00000439805 662 ntBASIC21.05■□□□□ 0.96
PDE6BP35913 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC21.05■□□□□ 0.96
PDE6BP35913 MEIS3P1-201ENST00000495167 958 ntBASIC21.05■□□□□ 0.96
PDE6BP35913 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC21.05■□□□□ 0.96
PDE6BP35913 AL596325.1-201ENST00000563991 1082 ntBASIC21.05■□□□□ 0.96
PDE6BP35913 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PDE6BP35913 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC21.05■□□□□ 0.96
PDE6BP35913 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.05■□□□□ 0.96
PDE6BP35913 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PDE6BP35913 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDE6BP35913 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDE6BP35913 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDE6BP35913 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
PDE6BP35913 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PDE6BP35913 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDE6BP35913 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDE6BP35913 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDE6BP35913 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDE6BP35913 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDE6BP35913 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
PDE6BP35913 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PDE6BP35913 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDE6BP35913 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDE6BP35913 RNU1-129P-201ENST00000384064 167 ntBASIC21.04■□□□□ 0.96
PDE6BP35913 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
PDE6BP35913 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC21.04■□□□□ 0.96
PDE6BP35913 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC21.04■□□□□ 0.96
PDE6BP35913 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
PDE6BP35913 AC027369.6-201ENST00000525520 931 ntBASIC21.04■□□□□ 0.96
PDE6BP35913 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC21.04■□□□□ 0.96
PDE6BP35913 MIR3909-201ENST00000579518 119 ntBASIC21.04■□□□□ 0.96
PDE6BP35913 U1.21-201ENST00000580816 167 ntBASIC21.04■□□□□ 0.96
PDE6BP35913 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC21.04■□□□□ 0.96
PDE6BP35913 AL359881.2-201ENST00000602973 570 ntBASIC21.04■□□□□ 0.96
PDE6BP35913 AL031055.1-201ENST00000606362 631 ntBASIC21.04■□□□□ 0.96
PDE6BP35913 AC073592.8-201ENST00000624126 511 ntBASIC21.04■□□□□ 0.96
PDE6BP35913 TDG-209ENST00000544861 1387 ntTSL 2 BASIC21.04■□□□□ 0.96
PDE6BP35913 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
PDE6BP35913 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.04■□□□□ 0.96
PDE6BP35913 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDE6BP35913 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDE6BP35913 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDE6BP35913 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
PDE6BP35913 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDE6BP35913 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.04■□□□□ 0.96
PDE6BP35913 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDE6BP35913 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDE6BP35913 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDE6BP35913 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDE6BP35913 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDE6BP35913 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDE6BP35913 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDE6BP35913 AC100757.3-201ENST00000622361 1406 ntBASIC21.04■□□□□ 0.96
PDE6BP35913 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDE6BP35913 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.03■□□□□ 0.96
PDE6BP35913 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDE6BP35913 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDE6BP35913 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDE6BP35913 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.03■□□□□ 0.96
PDE6BP35913 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms