Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PTPN7P35236 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.83■□□□□ 0.45
PTPN7P35236 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTPN7P35236 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
PTPN7P35236 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.83■□□□□ 0.44
PTPN7P35236 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN7P35236 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN7P35236 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.83■□□□□ 0.44
PTPN7P35236 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
PTPN7P35236 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.83■□□□□ 0.44
PTPN7P35236 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN7P35236 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.83■□□□□ 0.44
PTPN7P35236 LINC00265-3P-201ENST00000447588 903 ntBASIC17.83■□□□□ 0.44
PTPN7P35236 SIGLEC30P-201ENST00000455569 941 ntBASIC17.83■□□□□ 0.44
PTPN7P35236 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.83■□□□□ 0.44
PTPN7P35236 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN7P35236 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN7P35236 NPAP1P7-201ENST00000613027 823 ntBASIC17.83■□□□□ 0.44
PTPN7P35236 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN7P35236 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.83■□□□□ 0.44
PTPN7P35236 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
PTPN7P35236 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.83■□□□□ 0.44
PTPN7P35236 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
PTPN7P35236 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN7P35236 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN7P35236 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN7P35236 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.83■□□□□ 0.44
PTPN7P35236 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.83■□□□□ 0.44
PTPN7P35236 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN7P35236 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN7P35236 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN7P35236 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN7P35236 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTPN7P35236 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PTPN7P35236 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.82■□□□□ 0.44
PTPN7P35236 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PTPN7P35236 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN7P35236 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN7P35236 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN7P35236 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN7P35236 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.82■□□□□ 0.44
PTPN7P35236 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
PTPN7P35236 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN7P35236 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN7P35236 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.82■□□□□ 0.44
PTPN7P35236 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN7P35236 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.82■□□□□ 0.44
PTPN7P35236 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.82■□□□□ 0.44
PTPN7P35236 DUX4L17-201ENST00000557360 1267 ntBASIC17.82■□□□□ 0.44
PTPN7P35236 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.82■□□□□ 0.44
PTPN7P35236 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.82■□□□□ 0.44
PTPN7P35236 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.82■□□□□ 0.44
PTPN7P35236 AP000550.4-202ENST00000639755 178 ntBASIC17.82■□□□□ 0.44
PTPN7P35236 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.82■□□□□ 0.44
PTPN7P35236 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PTPN7P35236 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
PTPN7P35236 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN7P35236 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.82■□□□□ 0.44
PTPN7P35236 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN7P35236 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN7P35236 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN7P35236 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.82■□□□□ 0.44
PTPN7P35236 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN7P35236 PCDHA14-201ENST00000506751 2298 ntBASIC17.82■□□□□ 0.44
PTPN7P35236 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN7P35236 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN7P35236 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PTPN7P35236 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN7P35236 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN7P35236 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN7P35236 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPN7P35236 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.81■□□□□ 0.44
PTPN7P35236 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PTPN7P35236 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN7P35236 TUBB8P12-201ENST00000308911 1335 ntBASIC17.81■□□□□ 0.44
PTPN7P35236 TUBB7P-202ENST00000428444 1305 ntBASIC17.81■□□□□ 0.44
PTPN7P35236 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN7P35236 TUBB8P7-204ENST00000567960 1332 ntBASIC17.81■□□□□ 0.44
PTPN7P35236 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN7P35236 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.81■□□□□ 0.44
PTPN7P35236 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN7P35236 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN7P35236 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PTPN7P35236 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PTPN7P35236 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN7P35236 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPN7P35236 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN7P35236 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN7P35236 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
PTPN7P35236 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN7P35236 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN7P35236 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.81■□□□□ 0.44
PTPN7P35236 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN7P35236 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.81■□□□□ 0.44
PTPN7P35236 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.81■□□□□ 0.44
PTPN7P35236 AC087388.1-201ENST00000571370 1112 ntBASIC17.81■□□□□ 0.44
PTPN7P35236 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.81■□□□□ 0.44
PTPN7P35236 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
PTPN7P35236 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
PTPN7P35236 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms