Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 FZD10-202ENST00000539839 3282 ntBASIC17.64■□□□□ 0.42
SLC6A4P31645 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.64■□□□□ 0.41
SLC6A4P31645 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SLC6A4P31645 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A4P31645 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A4P31645 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC6A4P31645 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SLC6A4P31645 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A4P31645 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SLC6A4P31645 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A4P31645 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A4P31645 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC6A4P31645 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A4P31645 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SLC6A4P31645 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SLC6A4P31645 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A4P31645 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC6A4P31645 AC010507.1-201ENST00000633895 436 ntBASIC17.64■□□□□ 0.41
SLC6A4P31645 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A4P31645 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A4P31645 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.64■□□□□ 0.41
SLC6A4P31645 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A4P31645 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SLC6A4P31645 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A4P31645 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.64■□□□□ 0.41
SLC6A4P31645 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SLC6A4P31645 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SLC6A4P31645 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A4P31645 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A4P31645 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A4P31645 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC6A4P31645 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A4P31645 AC139713.2-201ENST00000641328 2723 ntBASIC17.63■□□□□ 0.41
SLC6A4P31645 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC6A4P31645 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC6A4P31645 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SLC6A4P31645 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A4P31645 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC6A4P31645 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A4P31645 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A4P31645 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A4P31645 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A4P31645 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A4P31645 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A4P31645 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SLC6A4P31645 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A4P31645 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC6A4P31645 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC6A4P31645 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A4P31645 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.63■□□□□ 0.41
SLC6A4P31645 AC040169.1-201ENST00000565382 521 ntBASIC17.63■□□□□ 0.41
SLC6A4P31645 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.63■□□□□ 0.41
SLC6A4P31645 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC6A4P31645 AC092865.6-201ENST00000642101 219 ntBASIC17.63■□□□□ 0.41
SLC6A4P31645 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A4P31645 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC6A4P31645 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A4P31645 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A4P31645 AC002310.6-201ENST00000624451 1377 ntBASIC17.63■□□□□ 0.41
SLC6A4P31645 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SLC6A4P31645 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A4P31645 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A4P31645 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A4P31645 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A4P31645 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SLC6A4P31645 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A4P31645 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC6A4P31645 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC6A4P31645 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A4P31645 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A4P31645 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A4P31645 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A4P31645 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
SLC6A4P31645 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A4P31645 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A4P31645 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SLC6A4P31645 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SLC6A4P31645 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.62■□□□□ 0.41
SLC6A4P31645 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.62■□□□□ 0.41
SLC6A4P31645 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.62■□□□□ 0.41
SLC6A4P31645 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC6A4P31645 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC6A4P31645 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A4P31645 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A4P31645 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A4P31645 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
SLC6A4P31645 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SLC6A4P31645 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A4P31645 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.62■□□□□ 0.41
SLC6A4P31645 LETM1P2-201ENST00000597330 2178 ntBASIC17.62■□□□□ 0.41
SLC6A4P31645 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A4P31645 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC6A4P31645 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC6A4P31645 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC6A4P31645 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC6A4P31645 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SLC6A4P31645 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC6A4P31645 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC6A4P31645 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC6A4P31645 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms