Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC21.21■□□□□ 0.99
TM4SF1P30408 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.2■□□□□ 0.98
TM4SF1P30408 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TM4SF1P30408 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TM4SF1P30408 AC022144.1-201ENST00000602255 1580 ntBASIC21.2■□□□□ 0.98
TM4SF1P30408 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.2■□□□□ 0.98
TM4SF1P30408 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TM4SF1P30408 CALY-202ENST00000368555 783 ntTSL 2 BASIC21.2■□□□□ 0.98
TM4SF1P30408 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC21.2■□□□□ 0.98
TM4SF1P30408 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC21.2■□□□□ 0.98
TM4SF1P30408 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TM4SF1P30408 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TM4SF1P30408 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TM4SF1P30408 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TM4SF1P30408 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.2■□□□□ 0.98
TM4SF1P30408 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TM4SF1P30408 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.2■□□□□ 0.98
TM4SF1P30408 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TM4SF1P30408 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.2■□□□□ 0.98
TM4SF1P30408 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TM4SF1P30408 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC21.2■□□□□ 0.98
TM4SF1P30408 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TM4SF1P30408 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TM4SF1P30408 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.19■□□□□ 0.98
TM4SF1P30408 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TM4SF1P30408 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TM4SF1P30408 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TM4SF1P30408 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TM4SF1P30408 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TM4SF1P30408 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC21.19■□□□□ 0.98
TM4SF1P30408 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TM4SF1P30408 AC018529.1-201ENST00000613063 361 ntBASIC21.19■□□□□ 0.98
TM4SF1P30408 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TM4SF1P30408 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TM4SF1P30408 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TM4SF1P30408 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TM4SF1P30408 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TM4SF1P30408 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF1P30408 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.18■□□□□ 0.98
TM4SF1P30408 AC016027.1-202ENST00000607927 1699 ntBASIC21.18■□□□□ 0.98
TM4SF1P30408 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.18■□□□□ 0.98
TM4SF1P30408 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF1P30408 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF1P30408 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
TM4SF1P30408 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF1P30408 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF1P30408 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
TM4SF1P30408 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF1P30408 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TM4SF1P30408 AC142381.1-201ENST00000426099 345 ntBASIC21.18■□□□□ 0.98
TM4SF1P30408 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF1P30408 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF1P30408 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC21.18■□□□□ 0.98
TM4SF1P30408 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC21.18■□□□□ 0.98
TM4SF1P30408 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC21.18■□□□□ 0.98
TM4SF1P30408 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF1P30408 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF1P30408 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF1P30408 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TM4SF1P30408 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF1P30408 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF1P30408 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM4SF1P30408 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.17■□□□□ 0.98
TM4SF1P30408 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM4SF1P30408 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM4SF1P30408 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.17■□□□□ 0.98
TM4SF1P30408 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM4SF1P30408 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
TM4SF1P30408 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM4SF1P30408 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC21.17■□□□□ 0.98
TM4SF1P30408 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM4SF1P30408 NAA50-208ENST00000497255 789 ntTSL 5 BASIC21.17■□□□□ 0.98
TM4SF1P30408 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC21.17■□□□□ 0.98
TM4SF1P30408 LY6E-204ENST00000519546 971 ntTSL 2 BASIC21.17■□□□□ 0.98
TM4SF1P30408 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC21.17■□□□□ 0.98
TM4SF1P30408 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC21.17■□□□□ 0.98
TM4SF1P30408 AL138828.2-201ENST00000615812 383 ntBASIC21.17■□□□□ 0.98
TM4SF1P30408 SPDYE12P-201ENST00000618416 771 ntBASIC21.17■□□□□ 0.98
TM4SF1P30408 MIR6752-201ENST00000618442 71 ntBASIC21.17■□□□□ 0.98
TM4SF1P30408 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC21.17■□□□□ 0.98
TM4SF1P30408 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM4SF1P30408 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TM4SF1P30408 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM4SF1P30408 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM4SF1P30408 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.17■□□□□ 0.98
TM4SF1P30408 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TM4SF1P30408 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TM4SF1P30408 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
TM4SF1P30408 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM4SF1P30408 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TM4SF1P30408 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM4SF1P30408 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM4SF1P30408 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM4SF1P30408 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.16■□□□□ 0.98
TM4SF1P30408 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
TM4SF1P30408 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TM4SF1P30408 BICD1-207ENST00000551848 1962 ntBASIC21.16■□□□□ 0.98
TM4SF1P30408 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC21.16■□□□□ 0.98
TM4SF1P30408 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TM4SF1P30408 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms