Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.89■□□□□ 0.13
ABCD3P28288 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ABCD3P28288 AC073621.1-201ENST00000392730 636 ntBASIC15.89■□□□□ 0.13
ABCD3P28288 SLC25A1P3-201ENST00000395415 828 ntBASIC15.89■□□□□ 0.13
ABCD3P28288 AC079776.4-201ENST00000511039 504 ntBASIC15.89■□□□□ 0.13
ABCD3P28288 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.89■□□□□ 0.13
ABCD3P28288 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.89■□□□□ 0.13
ABCD3P28288 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.89■□□□□ 0.13
ABCD3P28288 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.89■□□□□ 0.13
ABCD3P28288 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.89■□□□□ 0.13
ABCD3P28288 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.89■□□□□ 0.13
ABCD3P28288 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.89■□□□□ 0.13
ABCD3P28288 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.89■□□□□ 0.13
ABCD3P28288 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ABCD3P28288 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ABCD3P28288 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
ABCD3P28288 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.89■□□□□ 0.13
ABCD3P28288 GPR89P-201ENST00000407924 1495 ntBASIC15.89■□□□□ 0.13
ABCD3P28288 AL590787.1-201ENST00000568856 1315 ntBASIC15.89■□□□□ 0.13
ABCD3P28288 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ABCD3P28288 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ABCD3P28288 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ABCD3P28288 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ABCD3P28288 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
ABCD3P28288 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ABCD3P28288 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ABCD3P28288 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
ABCD3P28288 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.88■□□□□ 0.13
ABCD3P28288 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.88■□□□□ 0.13
ABCD3P28288 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ABCD3P28288 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
ABCD3P28288 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
ABCD3P28288 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ABCD3P28288 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.88■□□□□ 0.13
ABCD3P28288 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ABCD3P28288 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
ABCD3P28288 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
ABCD3P28288 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ABCD3P28288 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.88■□□□□ 0.13
ABCD3P28288 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.88■□□□□ 0.13
ABCD3P28288 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
ABCD3P28288 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
ABCD3P28288 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.88■□□□□ 0.13
ABCD3P28288 AC136632.2-201ENST00000512891 861 ntBASIC15.88■□□□□ 0.13
ABCD3P28288 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.88■□□□□ 0.13
ABCD3P28288 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.88■□□□□ 0.13
ABCD3P28288 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.88■□□□□ 0.13
ABCD3P28288 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.88■□□□□ 0.13
ABCD3P28288 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.88■□□□□ 0.13
ABCD3P28288 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
ABCD3P28288 AL356488.2-201ENST00000602755 427 ntBASIC15.88■□□□□ 0.13
ABCD3P28288 MIR1199-201ENST00000621445 119 ntBASIC15.88■□□□□ 0.13
ABCD3P28288 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.88■□□□□ 0.13
ABCD3P28288 AC116407.3-201ENST00000623905 1129 ntBASIC15.88■□□□□ 0.13
ABCD3P28288 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ABCD3P28288 AP002414.3-201ENST00000589352 1468 ntBASIC15.88■□□□□ 0.13
ABCD3P28288 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
ABCD3P28288 AL645608.8-201ENST00000606034 2086 ntBASIC15.88■□□□□ 0.13
ABCD3P28288 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.88■□□□□ 0.13
ABCD3P28288 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.88■□□□□ 0.13
ABCD3P28288 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ABCD3P28288 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.88■□□□□ 0.13
ABCD3P28288 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
ABCD3P28288 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
ABCD3P28288 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ABCD3P28288 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
ABCD3P28288 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
ABCD3P28288 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ABCD3P28288 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ABCD3P28288 AC243591.1-201ENST00000452967 1364 ntBASIC15.87■□□□□ 0.13
ABCD3P28288 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ABCD3P28288 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
ABCD3P28288 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ABCD3P28288 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ABCD3P28288 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ABCD3P28288 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ABCD3P28288 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ABCD3P28288 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
ABCD3P28288 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ABCD3P28288 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
ABCD3P28288 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ABCD3P28288 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
ABCD3P28288 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ABCD3P28288 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.87■□□□□ 0.13
ABCD3P28288 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ABCD3P28288 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ABCD3P28288 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.87■□□□□ 0.13
ABCD3P28288 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.87■□□□□ 0.13
ABCD3P28288 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.87■□□□□ 0.13
ABCD3P28288 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.87■□□□□ 0.13
ABCD3P28288 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.87■□□□□ 0.13
ABCD3P28288 AC092910.1-201ENST00000482027 1129 ntBASIC15.87■□□□□ 0.13
ABCD3P28288 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.87■□□□□ 0.13
ABCD3P28288 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ABCD3P28288 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.87■□□□□ 0.13
ABCD3P28288 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.87■□□□□ 0.13
ABCD3P28288 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.87■□□□□ 0.13
ABCD3P28288 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.87■□□□□ 0.13
ABCD3P28288 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ABCD3P28288 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms