Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GDF1P27539 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.64■□□□□ 0.09
GDF1P27539 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.64■□□□□ 0.09
GDF1P27539 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GDF1P27539 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.64■□□□□ 0.09
GDF1P27539 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
GDF1P27539 AC064836.3-201ENST00000607928 673 ntBASIC15.64■□□□□ 0.09
GDF1P27539 AC004790.2-201ENST00000623588 572 ntBASIC15.64■□□□□ 0.09
GDF1P27539 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
GDF1P27539 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
GDF1P27539 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.64■□□□□ 0.09
GDF1P27539 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GDF1P27539 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.64■□□□□ 0.09
GDF1P27539 AL590787.1-201ENST00000568856 1315 ntBASIC15.64■□□□□ 0.09
GDF1P27539 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GDF1P27539 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GDF1P27539 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.64■□□□□ 0.09
GDF1P27539 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.64■□□□□ 0.09
GDF1P27539 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GDF1P27539 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GDF1P27539 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
GDF1P27539 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GDF1P27539 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.63■□□□□ 0.09
GDF1P27539 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.63■□□□□ 0.09
GDF1P27539 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.63■□□□□ 0.09
GDF1P27539 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
GDF1P27539 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
GDF1P27539 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GDF1P27539 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.63■□□□□ 0.09
GDF1P27539 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
GDF1P27539 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
GDF1P27539 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.63■□□□□ 0.09
GDF1P27539 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GDF1P27539 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GDF1P27539 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GDF1P27539 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GDF1P27539 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
GDF1P27539 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.63■□□□□ 0.09
GDF1P27539 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.63■□□□□ 0.09
GDF1P27539 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.63■□□□□ 0.09
GDF1P27539 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.63■□□□□ 0.09
GDF1P27539 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.63■□□□□ 0.09
GDF1P27539 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.63■□□□□ 0.09
GDF1P27539 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.63■□□□□ 0.09
GDF1P27539 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GDF1P27539 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GDF1P27539 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GDF1P27539 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GDF1P27539 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.63■□□□□ 0.09
GDF1P27539 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
GDF1P27539 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GDF1P27539 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
GDF1P27539 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GDF1P27539 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GDF1P27539 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GDF1P27539 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
GDF1P27539 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GDF1P27539 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GDF1P27539 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
GDF1P27539 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GDF1P27539 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
GDF1P27539 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GDF1P27539 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GDF1P27539 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
GDF1P27539 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
GDF1P27539 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GDF1P27539 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.62■□□□□ 0.09
GDF1P27539 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.62■□□□□ 0.09
GDF1P27539 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GDF1P27539 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
GDF1P27539 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.62■□□□□ 0.09
GDF1P27539 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.62■□□□□ 0.09
GDF1P27539 AC092865.5-201ENST00000545435 363 ntBASIC15.62■□□□□ 0.09
GDF1P27539 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.62■□□□□ 0.09
GDF1P27539 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.62■□□□□ 0.09
GDF1P27539 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.62■□□□□ 0.09
GDF1P27539 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
GDF1P27539 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
GDF1P27539 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
GDF1P27539 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.62■□□□□ 0.09
GDF1P27539 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GDF1P27539 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
GDF1P27539 NOC2LP2-201ENST00000407594 1944 ntBASIC15.62■□□□□ 0.09
GDF1P27539 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
GDF1P27539 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
GDF1P27539 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GDF1P27539 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GDF1P27539 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
GDF1P27539 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
GDF1P27539 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.62■□□□□ 0.09
GDF1P27539 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GDF1P27539 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
GDF1P27539 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GDF1P27539 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GDF1P27539 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
GDF1P27539 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.61■□□□□ 0.09
GDF1P27539 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GDF1P27539 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GDF1P27539 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.61■□□□□ 0.09
GDF1P27539 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms