Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CHMLP26374 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHMLP26374 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.77■□□□□ 0.92
CHMLP26374 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMLP26374 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHMLP26374 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.77■□□□□ 0.92
CHMLP26374 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.77■□□□□ 0.92
CHMLP26374 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.77■□□□□ 0.92
CHMLP26374 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.77■□□□□ 0.92
CHMLP26374 PRELID1P1-202ENST00000567272 903 ntBASIC20.77■□□□□ 0.92
CHMLP26374 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.77■□□□□ 0.92
CHMLP26374 REXO1L6P-202ENST00000619970 1078 ntBASIC20.77■□□□□ 0.92
CHMLP26374 AL022326.1-202ENST00000641533 845 ntBASIC20.77■□□□□ 0.92
CHMLP26374 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMLP26374 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHMLP26374 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CHMLP26374 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CHMLP26374 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CHMLP26374 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.77■□□□□ 0.92
CHMLP26374 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CHMLP26374 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHMLP26374 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
CHMLP26374 AL590787.1-201ENST00000568856 1315 ntBASIC20.77■□□□□ 0.91
CHMLP26374 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
CHMLP26374 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
CHMLP26374 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.77■□□□□ 0.91
CHMLP26374 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMLP26374 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMLP26374 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMLP26374 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMLP26374 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
CHMLP26374 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMLP26374 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMLP26374 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.76■□□□□ 0.91
CHMLP26374 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMLP26374 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMLP26374 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMLP26374 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMLP26374 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.76■□□□□ 0.91
CHMLP26374 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.76■□□□□ 0.91
CHMLP26374 SART3-203ENST00000546611 1184 ntBASIC20.76■□□□□ 0.91
CHMLP26374 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.76■□□□□ 0.91
CHMLP26374 CLEC4GP1-201ENST00000596555 870 ntBASIC20.76■□□□□ 0.91
CHMLP26374 AL139288.1-201ENST00000623748 933 ntBASIC20.76■□□□□ 0.91
CHMLP26374 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CHMLP26374 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.76■□□□□ 0.91
CHMLP26374 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMLP26374 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CHMLP26374 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHMLP26374 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.76■□□□□ 0.91
CHMLP26374 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CHMLP26374 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMLP26374 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMLP26374 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMLP26374 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.75■□□□□ 0.91
CHMLP26374 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.75■□□□□ 0.91
CHMLP26374 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CHMLP26374 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHMLP26374 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMLP26374 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMLP26374 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMLP26374 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CHMLP26374 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMLP26374 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMLP26374 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CHMLP26374 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.75■□□□□ 0.91
CHMLP26374 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMLP26374 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHMLP26374 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMLP26374 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.75■□□□□ 0.91
CHMLP26374 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CHMLP26374 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHMLP26374 PCDHB17P-201ENST00000539533 2393 ntBASIC20.75■□□□□ 0.91
CHMLP26374 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
CHMLP26374 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CHMLP26374 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.75■□□□□ 0.91
CHMLP26374 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CHMLP26374 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CHMLP26374 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
CHMLP26374 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHMLP26374 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMLP26374 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
CHMLP26374 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMLP26374 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMLP26374 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CHMLP26374 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.74■□□□□ 0.91
CHMLP26374 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.74■□□□□ 0.91
CHMLP26374 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHMLP26374 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMLP26374 AP002414.1-201ENST00000391405 1147 ntBASIC20.74■□□□□ 0.91
CHMLP26374 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHMLP26374 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.74■□□□□ 0.91
CHMLP26374 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.74■□□□□ 0.91
CHMLP26374 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.74■□□□□ 0.91
CHMLP26374 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.74■□□□□ 0.91
CHMLP26374 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.74■□□□□ 0.91
CHMLP26374 AC008608.2-201ENST00000606089 416 ntBASIC20.74■□□□□ 0.91
CHMLP26374 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHMLP26374 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CHMLP26374 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms