Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 MIDN-203ENST00000586843 416 ntTSL 220.74■□□□□ 0.915e-7■■■□□ 15.2
RPS3P23396 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.795e-7■■■□□ 15.2
RPS3P23396 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.75e-7■■■□□ 15.2
RPS3P23396 PFKL-206ENST00000467315 1947 ntTSL 219.23■□□□□ 0.675e-7■■■□□ 15.2
RPS3P23396 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.675e-7■■■□□ 15.2
RPS3P23396 MAEA-206ENST00000503693 1182 ntTSL 1 (best)18.99■□□□□ 0.635e-7■■■□□ 15.2
RPS3P23396 AMZ2-211ENST00000580837 713 ntTSL 518.52■□□□□ 0.565e-7■■■□□ 15.2
RPS3P23396 MIDN-205ENST00000591302 523 ntTSL 218.39■□□□□ 0.535e-7■■■□□ 15.2
RPS3P23396 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.92■□□□□ 0.465e-7■■■□□ 15.2
RPS3P23396 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.365e-7■■■□□ 15.2
RPS3P23396 SPHK1-209ENST00000591762 2502 ntTSL 217.25■□□□□ 0.355e-7■■■□□ 15.2
RPS3P23396 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.355e-7■■■□□ 15.2
RPS3P23396 MIDN-204ENST00000590136 536 ntTSL 216.5■□□□□ 0.235e-7■■■□□ 15.2
RPS3P23396 MAEA-218ENST00000513301 595 ntTSL 416.48■□□□□ 0.235e-7■■■□□ 15.2
RPS3P23396 MAEA-203ENST00000502558 570 ntTSL 216.47■□□□□ 0.235e-7■■■□□ 15.2
RPS3P23396 MAEA-216ENST00000512308 839 ntTSL 516.15■□□□□ 0.185e-7■■■□□ 15.2
RPS3P23396 PFKL-211ENST00000498841 3122 ntTSL 1 (best)16.14■□□□□ 0.175e-7■■■□□ 15.2
RPS3P23396 RPL14-206ENST00000465280 616 ntTSL 215.67■□□□□ 0.15e-7■■■□□ 15.2
RPS3P23396 MAEA-211ENST00000509254 598 ntTSL 415.46■□□□□ 0.075e-7■■■□□ 15.2
RPS3P23396 PIGG-219ENST00000511247 746 ntTSL 315.22■□□□□ 0.035e-7■■■□□ 15.2
RPS3P23396 PFKL-204ENST00000460521 2818 ntTSL 214.11□□□□□ -0.155e-7■■■□□ 15.2
RPS3P23396 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.08□□□□□ -0.165e-7■■■□□ 15.2
RPS3P23396 HDGF-207ENST00000477306 686 ntTSL 213.91□□□□□ -0.185e-7■■■□□ 15.2
RPS3P23396 MAEA-217ENST00000512842 550 ntTSL 413.88□□□□□ -0.195e-7■■■□□ 15.2
RPS3P23396 AMZ2-208ENST00000579724 722 ntTSL 513.72□□□□□ -0.215e-7■■■□□ 15.2
RPS3P23396 AMZ2-217ENST00000584837 672 ntTSL 513.07□□□□□ -0.325e-7■■■□□ 15.2
RPS3P23396 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC13.03□□□□□ -0.325e-7■■■□□ 15.2
RPS3P23396 PIGG-215ENST00000508562 570 ntTSL 412.55□□□□□ -0.45e-7■■■□□ 15.2
RPS3P23396 PIGG-201ENST00000310340 3203 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.435e-7■■■□□ 15.2
RPS3P23396 JPT1-204ENST00000465454 509 ntTSL 412.34□□□□□ -0.432e-9■■■□□ 15.2
RPS3P23396 PIGG-203ENST00000453061 3218 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.495e-7■■■□□ 15.2
RPS3P23396 CYFIP1-207ENST00000617556 5674 ntTSL 1 (best) BASIC11.9□□□□□ -0.515e-7■■■□□ 15.2
RPS3P23396 CYFIP1-210ENST00000619290 929 ntTSL 1 (best)11.41□□□□□ -0.585e-7■■■□□ 15.2
RPS3P23396 PRRC1-206ENST00000513427 837 ntTSL 211.06□□□□□ -0.646e-8■■■□□ 15.2
RPS3P23396 RUVBL1-203ENST00000472125 913 ntTSL 310.09□□□□□ -0.795e-7■■■□□ 15.2
RPS3P23396 RPL14-208ENST00000479563 794 ntTSL 1 (best)9.69□□□□□ -0.865e-7■■■□□ 15.2
RPS3P23396 HDGF-208ENST00000482651 966 ntTSL 38.47□□□□□ -1.055e-7■■■□□ 15.2
RPS3P23396 AC087289.3-203ENST00000587556 550 ntAPPRIS P5 TSL 4 BASIC8.33□□□□□ -1.083e-6■■■□□ 15.2
RPS3P23396 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.25e-7■■■□□ 15.2
RPS3P23396 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.99□□□□□ -1.295e-7■■■□□ 15.2
RPS3P23396 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.94□□□□□ -1.35e-7■■■□□ 15.2
RPS3P23396 AMZ2-215ENST00000584494 897 ntTSL 36.72□□□□□ -1.335e-7■■■□□ 15.2
RPS3P23396 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.455e-7■■■□□ 15.2
RPS3P23396 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.192e-7■■■□□ 15.2
RPS3P23396 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.142e-7■■■□□ 15.2
RPS3P23396 BMP4-205ENST00000558984 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.342e-7■■■□□ 15.2
RPS3P23396 BMP4-202ENST00000417573 1784 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.472e-7■■■□□ 15.2
RPS3P23396 BMP4-207ENST00000559501 1112 ntTSL 210.91□□□□□ -0.662e-7■■■□□ 15.2
RPS3P23396 TPI1-204ENST00000474253 427 ntTSL 1 (best)11□□□□□ -0.652e-8■■■□□ 15.2
RPS3P23396 RETSAT-203ENST00000429806 2335 ntTSL 1 (best)12.15□□□□□ -0.463e-8■■■□□ 15.2
RPS3P23396 LSR-209ENST00000601623 530 ntTSL 510.59□□□□□ -0.719e-10■■■□□ 15.2
RPS3P23396 FLNA-216ENST00000490936 5374 ntTSL 1 (best)15.28■□□□□ 0.044e-7■■■□□ 15.2
RPS3P23396 SQSTM1-205ENST00000464493 532 ntTSL 414.21□□□□□ -0.133e-7■■■□□ 15.2
RPS3P23396 SQSTM1-203ENST00000422245 628 ntTSL 411.11□□□□□ -0.633e-7■■■□□ 15.2
RPS3P23396 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.93■□□□□ 0.35e-11■■■□□ 15.2
RPS3P23396 ITM2B-202ENST00000378565 10137 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.615e-11■■■□□ 15.2
RPS3P23396 FLNB-203ENST00000419752 2002 ntTSL 5 BASIC11.84□□□□□ -0.514e-7■■■□□ 15.2
RPS3P23396 FLNB-211ENST00000484981 932 ntTSL 510.11□□□□□ -0.794e-7■■■□□ 15.2
RPS3P23396 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.127e-8■■■□□ 15.2
RPS3P23396 SLC13A5-201ENST00000293800 3176 ntTSL 2 BASIC10.64□□□□□ -0.717e-8■■■□□ 15.2
RPS3P23396 PAICS-204ENST00000505164 1514 ntTSL 215.01□□□□□ -0.012e-8■■■□□ 15.2
RPS3P23396 SERPINA5-212ENST00000556775 829 ntTSL 59.92□□□□□ -0.822e-9■■■□□ 15.2
RPS3P23396 CALR-205ENST00000587486 957 ntTSL 216.27■□□□□ 0.22e-22■■■□□ 15.2
RPS3P23396 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.63e-7■■■□□ 15.2
RPS3P23396 ANXA5-207ENST00000513428 868 ntTSL 213.22□□□□□ -0.295e-7■■■□□ 15.2
RPS3P23396 ANXA5-209ENST00000513728 447 ntTSL 313.22□□□□□ -0.295e-7■■■□□ 15.2
RPS3P23396 ANXA5-208ENST00000513523 582 ntTSL 312.33□□□□□ -0.445e-7■■■□□ 15.2
RPS3P23396 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30.6■■■□□ 2.494e-7■■■□□ 15.2
RPS3P23396 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.364e-7■■■□□ 15.2
RPS3P23396 MVD-212ENST00000565842 285 ntTSL 323.28■■□□□ 1.321e-11■■■□□ 15.2
RPS3P23396 EML3-206ENST00000439994 671 ntTSL 523.2■■□□□ 1.31e-8■■■□□ 15.2
RPS3P23396 EML3-207ENST00000460939 1770 ntTSL 522.86■■□□□ 1.251e-8■■■□□ 15.2
RPS3P23396 RAB10-204ENST00000495146 1292 ntTSL 521.97■■□□□ 1.114e-10■■■□□ 15.2
RPS3P23396 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.27■■□□□ 14e-7■■■□□ 15.2
RPS3P23396 NSFL1C-209ENST00000489203 694 ntTSL 321.25■□□□□ 0.991e-8■■■□□ 15.2
RPS3P23396 SDF4-206ENST00000478938 2591 ntTSL 220.82■□□□□ 0.924e-7■■■□□ 15.2
RPS3P23396 MVD-204ENST00000562741 217 ntTSL 220.26■□□□□ 0.831e-11■■■□□ 15.2
RPS3P23396 WDR13-205ENST00000472440 430 ntTSL 220.2■□□□□ 0.824e-7■■■□□ 15.2
RPS3P23396 NSFL1C-211ENST00000555359 450 ntTSL 320.08■□□□□ 0.814e-7■■■□□ 15.2
RPS3P23396 NSFL1C-207ENST00000478168 624 ntTSL 220.08■□□□□ 0.814e-7■■■□□ 15.2
RPS3P23396 SYMPK-209ENST00000598155 1603 ntTSL 519.31■□□□□ 0.684e-7■■■□□ 15.2
RPS3P23396 MVD-210ENST00000565610 507 ntTSL 319.14■□□□□ 0.651e-11■■■□□ 15.2
RPS3P23396 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.39■□□□□ 0.531e-8■■■□□ 15.2
RPS3P23396 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.54e-10■■■□□ 15.2
RPS3P23396 EML3-203ENST00000394776 2818 ntTSL 217.95■□□□□ 0.461e-8■■■□□ 15.2
RPS3P23396 NT5DC2-209ENST00000478091 590 ntTSL 317.8■□□□□ 0.444e-7■■■□□ 15.2
RPS3P23396 NT5DC2-215ENST00000492555 2004 ntTSL 1 (best)17.76■□□□□ 0.434e-7■■■□□ 15.2
RPS3P23396 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.26■□□□□ 0.351e-8■■■□□ 15.2
RPS3P23396 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.26■□□□□ 0.351e-8■■■□□ 15.2
RPS3P23396 NT5DC2-206ENST00000466112 887 ntTSL 217.18■□□□□ 0.344e-7■■■□□ 15.2
RPS3P23396 ITGA5-213ENST00000553071 1013 ntTSL 1 (best)16.98■□□□□ 0.314e-18■■■□□ 15.2
RPS3P23396 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.281e-8■■■□□ 15.2
RPS3P23396 NSFL1C-208ENST00000487086 456 ntTSL 216.31■□□□□ 0.24e-7■■■□□ 15.2
RPS3P23396 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.184e-7■■■□□ 15.2
RPS3P23396 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.174e-7■■■□□ 15.2
RPS3P23396 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.124e-7■■■□□ 15.2
RPS3P23396 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.73■□□□□ 0.114e-7■■■□□ 15.2
RPS3P23396 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.041e-8■■■□□ 15.2
RPS3P23396 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.07■□□□□ 04e-7■■■□□ 15.2
RPS3P23396 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.89□□□□□ -0.034e-7■■■□□ 15.2
Retrieved 100 of 24,271 protein–RNA pairs in 313.7 ms