Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.83□□□□□ -0.03
CCL1P22362 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CCL1P22362 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.83□□□□□ -0.03
CCL1P22362 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CCL1P22362 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCL1P22362 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.03
CCL1P22362 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCL1P22362 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.83□□□□□ -0.04
CCL1P22362 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL1P22362 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL1P22362 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCL1P22362 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL1P22362 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL1P22362 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCL1P22362 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.83□□□□□ -0.04
CCL1P22362 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL1P22362 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CCL1P22362 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.83□□□□□ -0.04
CCL1P22362 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.83□□□□□ -0.04
CCL1P22362 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.83□□□□□ -0.04
CCL1P22362 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.83□□□□□ -0.04
CCL1P22362 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL1P22362 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCL1P22362 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.83□□□□□ -0.04
CCL1P22362 TNRC18P3-201ENST00000441896 2691 ntBASIC14.83□□□□□ -0.04
CCL1P22362 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.83□□□□□ -0.04
CCL1P22362 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL1P22362 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL1P22362 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL1P22362 PCDHB17P-201ENST00000539533 2393 ntBASIC14.83□□□□□ -0.04
CCL1P22362 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL1P22362 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL1P22362 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
CCL1P22362 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL1P22362 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL1P22362 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.83□□□□□ -0.04
CCL1P22362 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL1P22362 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL1P22362 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL1P22362 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL1P22362 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCL1P22362 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL1P22362 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCL1P22362 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CCL1P22362 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL1P22362 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.82□□□□□ -0.04
CCL1P22362 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.82□□□□□ -0.04
CCL1P22362 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.82□□□□□ -0.04
CCL1P22362 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCL1P22362 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL1P22362 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL1P22362 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.82□□□□□ -0.04
CCL1P22362 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.82□□□□□ -0.04
CCL1P22362 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CCL1P22362 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.82□□□□□ -0.04
CCL1P22362 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CCL1P22362 AC074051.2-201ENST00000565115 352 ntBASIC14.82□□□□□ -0.04
CCL1P22362 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.82□□□□□ -0.04
CCL1P22362 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.82□□□□□ -0.04
CCL1P22362 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.82□□□□□ -0.04
CCL1P22362 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCL1P22362 AL590326.2-201ENST00000625139 305 ntBASIC14.82□□□□□ -0.04
CCL1P22362 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL1P22362 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCL1P22362 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCL1P22362 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.82□□□□□ -0.04
CCL1P22362 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL1P22362 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CCL1P22362 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL1P22362 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL1P22362 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL1P22362 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.82□□□□□ -0.04
CCL1P22362 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCL1P22362 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCL1P22362 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCL1P22362 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCL1P22362 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL1P22362 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.82□□□□□ -0.04
CCL1P22362 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCL1P22362 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCL1P22362 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCL1P22362 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.81□□□□□ -0.04
CCL1P22362 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CCL1P22362 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
CCL1P22362 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CCL1P22362 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL1P22362 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.81□□□□□ -0.04
CCL1P22362 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL1P22362 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CCL1P22362 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCL1P22362 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.81□□□□□ -0.04
CCL1P22362 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CCL1P22362 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL1P22362 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL1P22362 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL1P22362 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.81□□□□□ -0.04
CCL1P22362 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CCL1P22362 AP002414.1-201ENST00000391405 1147 ntBASIC14.81□□□□□ -0.04
CCL1P22362 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
CCL1P22362 AC012615.1-201ENST00000565797 1299 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms