Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
RAB4AP20338 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.27□□□□□ -0.29
RAB4AP20338 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB4AP20338 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB4AP20338 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB4AP20338 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB4AP20338 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC13.27□□□□□ -0.29
RAB4AP20338 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB4AP20338 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RAB4AP20338 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB4AP20338 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.27□□□□□ -0.29
RAB4AP20338 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB4AP20338 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB4AP20338 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB4AP20338 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB4AP20338 AL513523.2-202ENST00000427283 2040 ntBASIC13.27□□□□□ -0.29
RAB4AP20338 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB4AP20338 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB4AP20338 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB4AP20338 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.27□□□□□ -0.29
RAB4AP20338 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
RAB4AP20338 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 MYO15B-237ENST00000642007 4893 ntBASIC13.26□□□□□ -0.29
RAB4AP20338 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB4AP20338 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.26□□□□□ -0.29
RAB4AP20338 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
RAB4AP20338 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB4AP20338 GRK6P1-201ENST00000400595 1711 ntBASIC13.26□□□□□ -0.29
RAB4AP20338 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 NBPF21P-201ENST00000425093 1451 ntBASIC13.26□□□□□ -0.29
RAB4AP20338 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.26□□□□□ -0.29
RAB4AP20338 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
RAB4AP20338 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.26□□□□□ -0.29
RAB4AP20338 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB4AP20338 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB4AP20338 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RAB4AP20338 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.26□□□□□ -0.29
RAB4AP20338 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB4AP20338 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB4AP20338 PRKY-204ENST00000533551 1019 ntBASIC13.26□□□□□ -0.29
RAB4AP20338 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB4AP20338 AC126177.1-201ENST00000547829 2218 ntBASIC13.26□□□□□ -0.29
RAB4AP20338 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC13.26□□□□□ -0.29
RAB4AP20338 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
RAB4AP20338 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
RAB4AP20338 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.26□□□□□ -0.29
RAB4AP20338 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC13.26□□□□□ -0.29
RAB4AP20338 AC004264.1-201ENST00000608354 794 ntBASIC13.26□□□□□ -0.29
RAB4AP20338 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RAB4AP20338 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RAB4AP20338 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RAB4AP20338 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB4AP20338 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.26□□□□□ -0.29
RAB4AP20338 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 PCDHA3-202ENST00000532566 4594 ntBASIC13.25□□□□□ -0.29
RAB4AP20338 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.25□□□□□ -0.29
RAB4AP20338 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.25□□□□□ -0.29
RAB4AP20338 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
RAB4AP20338 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.25□□□□□ -0.29
RAB4AP20338 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.25□□□□□ -0.29
RAB4AP20338 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
RAB4AP20338 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.25□□□□□ -0.29
RAB4AP20338 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RAB4AP20338 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms