Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
CCL3L1P16619 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CCL3L1P16619 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
CCL3L1P16619 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCL3L1P16619 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL3L1P16619 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL3L1P16619 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL3L1P16619 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CCL3L1P16619 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL3L1P16619 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL3L1P16619 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL3L1P16619 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL3L1P16619 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL3L1P16619 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CCL3L1P16619 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL3L1P16619 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CCL3L1P16619 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CCL3L1P16619 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CCL3L1P16619 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL3L1P16619 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL3L1P16619 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CCL3L1P16619 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CCL3L1P16619 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.24□□□□□ -0.13
CCL3L1P16619 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.24□□□□□ -0.13
CCL3L1P16619 SLC25A1P3-201ENST00000395415 828 ntBASIC14.24□□□□□ -0.13
CCL3L1P16619 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CCL3L1P16619 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL3L1P16619 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.24□□□□□ -0.13
CCL3L1P16619 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CCL3L1P16619 AF186996.4-201ENST00000467186 377 ntBASIC14.24□□□□□ -0.13
CCL3L1P16619 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL3L1P16619 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.24□□□□□ -0.13
CCL3L1P16619 AP002469.2-201ENST00000531724 424 ntBASIC14.24□□□□□ -0.13
CCL3L1P16619 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.24□□□□□ -0.13
CCL3L1P16619 AL160237.2-201ENST00000556165 472 ntBASIC14.24□□□□□ -0.13
CCL3L1P16619 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL3L1P16619 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.24□□□□□ -0.13
CCL3L1P16619 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.24□□□□□ -0.13
CCL3L1P16619 AC148477.8-201ENST00000624298 468 ntBASIC14.24□□□□□ -0.13
CCL3L1P16619 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL3L1P16619 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
CCL3L1P16619 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL3L1P16619 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 NCF1C-201ENST00000438382 1427 ntBASIC14.24□□□□□ -0.13
CCL3L1P16619 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL3L1P16619 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL3L1P16619 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL3L1P16619 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL3L1P16619 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
CCL3L1P16619 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CCL3L1P16619 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL3L1P16619 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL3L1P16619 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL3L1P16619 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL3L1P16619 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CCL3L1P16619 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL3L1P16619 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CCL3L1P16619 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL3L1P16619 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CCL3L1P16619 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL3L1P16619 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL3L1P16619 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL3L1P16619 ACTG1P4-201ENST00000425123 1122 ntBASIC14.23□□□□□ -0.13
CCL3L1P16619 KRT18P67-201ENST00000432816 1264 ntBASIC14.23□□□□□ -0.13
CCL3L1P16619 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CCL3L1P16619 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.23□□□□□ -0.13
CCL3L1P16619 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.23□□□□□ -0.13
CCL3L1P16619 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL3L1P16619 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CCL3L1P16619 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL3L1P16619 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL3L1P16619 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CCL3L1P16619 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL3L1P16619 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL3L1P16619 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms