Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 AC093525.9-201ENST00000624961 1746 ntBASIC19.8■□□□□ 0.76
BMP3P12645 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
BMP3P12645 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.8■□□□□ 0.76
BMP3P12645 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
BMP3P12645 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BMP3P12645 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.8■□□□□ 0.76
BMP3P12645 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.8■□□□□ 0.76
BMP3P12645 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.8■□□□□ 0.76
BMP3P12645 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.8■□□□□ 0.76
BMP3P12645 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
BMP3P12645 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.8■□□□□ 0.76
BMP3P12645 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.8■□□□□ 0.76
BMP3P12645 AC091812.2-201ENST00000619081 385 ntBASIC19.8■□□□□ 0.76
BMP3P12645 REXO1L3P-201ENST00000622202 1288 ntBASIC19.8■□□□□ 0.76
BMP3P12645 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
BMP3P12645 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.8■□□□□ 0.76
BMP3P12645 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.8■□□□□ 0.76
BMP3P12645 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
BMP3P12645 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
BMP3P12645 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
BMP3P12645 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
BMP3P12645 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BMP3P12645 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.8■□□□□ 0.76
BMP3P12645 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.8■□□□□ 0.76
BMP3P12645 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.79■□□□□ 0.76
BMP3P12645 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BMP3P12645 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BMP3P12645 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
BMP3P12645 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.79■□□□□ 0.76
BMP3P12645 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BMP3P12645 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BMP3P12645 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
BMP3P12645 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.79■□□□□ 0.76
BMP3P12645 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
BMP3P12645 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
BMP3P12645 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
BMP3P12645 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.79■□□□□ 0.76
BMP3P12645 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.79■□□□□ 0.76
BMP3P12645 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.79■□□□□ 0.76
BMP3P12645 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
BMP3P12645 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BMP3P12645 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BMP3P12645 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BMP3P12645 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.79■□□□□ 0.76
BMP3P12645 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.79■□□□□ 0.76
BMP3P12645 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.79■□□□□ 0.76
BMP3P12645 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.79■□□□□ 0.76
BMP3P12645 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
BMP3P12645 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BMP3P12645 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BMP3P12645 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BMP3P12645 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BMP3P12645 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
BMP3P12645 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BMP3P12645 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
BMP3P12645 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BMP3P12645 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BMP3P12645 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
BMP3P12645 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.78■□□□□ 0.76
BMP3P12645 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BMP3P12645 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BMP3P12645 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
BMP3P12645 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.78■□□□□ 0.76
BMP3P12645 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BMP3P12645 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BMP3P12645 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.78■□□□□ 0.76
BMP3P12645 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BMP3P12645 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
BMP3P12645 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BMP3P12645 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.78■□□□□ 0.76
BMP3P12645 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BMP3P12645 AC092919.2-201ENST00000623631 1645 ntBASIC19.78■□□□□ 0.76
BMP3P12645 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BMP3P12645 AC254562.1-201ENST00000417586 456 ntBASIC19.78■□□□□ 0.76
BMP3P12645 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.78■□□□□ 0.76
BMP3P12645 ACTG1P14-201ENST00000446382 1122 ntBASIC19.78■□□□□ 0.76
BMP3P12645 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BMP3P12645 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.78■□□□□ 0.76
BMP3P12645 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.78■□□□□ 0.76
BMP3P12645 SNHG9-202ENST00000564014 471 ntBASIC19.78■□□□□ 0.76
BMP3P12645 AP002472.1-201ENST00000577490 586 ntBASIC19.78■□□□□ 0.76
BMP3P12645 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.78■□□□□ 0.76
BMP3P12645 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.78■□□□□ 0.76
BMP3P12645 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
BMP3P12645 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BMP3P12645 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BMP3P12645 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
BMP3P12645 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BMP3P12645 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BMP3P12645 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.77■□□□□ 0.76
BMP3P12645 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.77■□□□□ 0.76
BMP3P12645 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
BMP3P12645 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
BMP3P12645 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
BMP3P12645 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
BMP3P12645 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
BMP3P12645 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
BMP3P12645 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BMP3P12645 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BMP3P12645 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms