Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.42■□□□□ 0.38
CHRNB1P11230 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CHRNB1P11230 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB1P11230 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB1P11230 AL138781.2-201ENST00000617896 1843 ntBASIC17.42■□□□□ 0.38
CHRNB1P11230 AC046185.3-201ENST00000623228 1824 ntBASIC17.42■□□□□ 0.38
CHRNB1P11230 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.42■□□□□ 0.38
CHRNB1P11230 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB1P11230 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB1P11230 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB1P11230 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.41■□□□□ 0.38
CHRNB1P11230 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB1P11230 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CHRNB1P11230 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CHRNB1P11230 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB1P11230 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB1P11230 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.41■□□□□ 0.38
CHRNB1P11230 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.41■□□□□ 0.38
CHRNB1P11230 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB1P11230 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB1P11230 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB1P11230 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.41■□□□□ 0.38
CHRNB1P11230 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.41■□□□□ 0.38
CHRNB1P11230 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB1P11230 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB1P11230 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB1P11230 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB1P11230 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.41■□□□□ 0.38
CHRNB1P11230 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB1P11230 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB1P11230 TFAMP1-201ENST00000412727 736 ntBASIC17.41■□□□□ 0.38
CHRNB1P11230 FAM58DP-201ENST00000428076 619 ntBASIC17.41■□□□□ 0.38
CHRNB1P11230 AC055876.3-201ENST00000431496 288 ntBASIC17.41■□□□□ 0.38
CHRNB1P11230 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.41■□□□□ 0.38
CHRNB1P11230 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.41■□□□□ 0.38
CHRNB1P11230 AL512356.2-201ENST00000546955 174 ntBASIC17.41■□□□□ 0.38
CHRNB1P11230 AC243562.1-201ENST00000560672 389 ntBASIC17.41■□□□□ 0.38
CHRNB1P11230 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB1P11230 AC138649.4-201ENST00000612222 287 ntBASIC17.41■□□□□ 0.38
CHRNB1P11230 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CHRNB1P11230 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.41■□□□□ 0.38
CHRNB1P11230 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.41■□□□□ 0.38
CHRNB1P11230 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB1P11230 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB1P11230 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.41■□□□□ 0.38
CHRNB1P11230 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB1P11230 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB1P11230 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.41■□□□□ 0.38
CHRNB1P11230 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CHRNB1P11230 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB1P11230 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB1P11230 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNB1P11230 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNB1P11230 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.4■□□□□ 0.38
CHRNB1P11230 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.4■□□□□ 0.38
CHRNB1P11230 AC099398.1-201ENST00000567919 2776 ntBASIC17.4■□□□□ 0.38
CHRNB1P11230 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNB1P11230 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNB1P11230 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNB1P11230 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNB1P11230 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNB1P11230 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNB1P11230 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
CHRNB1P11230 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNB1P11230 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNB1P11230 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.4■□□□□ 0.38
CHRNB1P11230 REXO1L9P-201ENST00000604264 2108 ntBASIC17.4■□□□□ 0.38
CHRNB1P11230 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.4■□□□□ 0.38
CHRNB1P11230 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNB1P11230 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CHRNB1P11230 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CHRNB1P11230 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNB1P11230 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.4■□□□□ 0.38
CHRNB1P11230 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.4■□□□□ 0.38
CHRNB1P11230 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNB1P11230 TNRC18P3-201ENST00000441896 2691 ntBASIC17.4■□□□□ 0.38
CHRNB1P11230 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CHRNB1P11230 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.4■□□□□ 0.38
CHRNB1P11230 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNB1P11230 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.4■□□□□ 0.38
CHRNB1P11230 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CHRNB1P11230 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.39■□□□□ 0.38
CHRNB1P11230 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHRNB1P11230 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNB1P11230 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNB1P11230 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CHRNB1P11230 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNB1P11230 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.39■□□□□ 0.37
CHRNB1P11230 AC015922.1-201ENST00000421102 1152 ntBASIC17.39■□□□□ 0.37
CHRNB1P11230 BASP1P1-201ENST00000430708 665 ntBASIC17.39■□□□□ 0.37
CHRNB1P11230 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.39■□□□□ 0.37
CHRNB1P11230 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CHRNB1P11230 RN7SL589P-201ENST00000481268 310 ntBASIC17.39■□□□□ 0.37
CHRNB1P11230 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.39■□□□□ 0.37
CHRNB1P11230 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.39■□□□□ 0.37
CHRNB1P11230 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNB1P11230 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.39■□□□□ 0.37
CHRNB1P11230 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.39■□□□□ 0.37
CHRNB1P11230 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CHRNB1P11230 AP001059.3-201ENST00000619053 235 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms