Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.66■□□□□ 0.1
CCL3P10147 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.66■□□□□ 0.1
CCL3P10147 EGFEM1P-202ENST00000431685 1563 ntBASIC15.66■□□□□ 0.1
CCL3P10147 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL3P10147 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL3P10147 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCL3P10147 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CCL3P10147 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL3P10147 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL3P10147 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCL3P10147 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CCL3P10147 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCL3P10147 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCL3P10147 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.66■□□□□ 0.1
CCL3P10147 SLC25A6P2-201ENST00000497974 877 ntBASIC15.66■□□□□ 0.1
CCL3P10147 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCL3P10147 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCL3P10147 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.66■□□□□ 0.1
CCL3P10147 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCL3P10147 AC010507.1-201ENST00000633895 436 ntBASIC15.66■□□□□ 0.1
CCL3P10147 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.66■□□□□ 0.1
CCL3P10147 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCL3P10147 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.66■□□□□ 0.1
CCL3P10147 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.66■□□□□ 0.1
CCL3P10147 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL3P10147 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.66■□□□□ 0.1
CCL3P10147 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL3P10147 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCL3P10147 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.66■□□□□ 0.1
CCL3P10147 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL3P10147 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CCL3P10147 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL3P10147 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL3P10147 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCL3P10147 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL3P10147 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL3P10147 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCL3P10147 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL3P10147 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CCL3P10147 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL3P10147 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL3P10147 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL3P10147 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL3P10147 AC116353.5-201ENST00000638148 1699 ntBASIC15.65■□□□□ 0.1
CCL3P10147 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL3P10147 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL3P10147 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CCL3P10147 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.65■□□□□ 0.1
CCL3P10147 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL3P10147 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.65■□□□□ 0.1
CCL3P10147 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.65■□□□□ 0.1
CCL3P10147 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL3P10147 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
CCL3P10147 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.65■□□□□ 0.1
CCL3P10147 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL3P10147 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL3P10147 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL3P10147 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL3P10147 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL3P10147 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.65■□□□□ 0.1
CCL3P10147 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCL3P10147 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL3P10147 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL3P10147 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.65■□□□□ 0.1
CCL3P10147 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL3P10147 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL3P10147 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CCL3P10147 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL3P10147 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL3P10147 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL3P10147 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
CCL3P10147 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL3P10147 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL3P10147 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL3P10147 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CCL3P10147 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.64■□□□□ 0.09
CCL3P10147 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
CCL3P10147 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL3P10147 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL3P10147 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.64■□□□□ 0.09
CCL3P10147 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL3P10147 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.64■□□□□ 0.09
CCL3P10147 AC002347.1-201ENST00000569543 541 ntBASIC15.64■□□□□ 0.09
CCL3P10147 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.64■□□□□ 0.09
CCL3P10147 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL3P10147 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.64■□□□□ 0.09
CCL3P10147 AC092865.6-201ENST00000642101 219 ntBASIC15.64■□□□□ 0.09
CCL3P10147 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.64■□□□□ 0.09
CCL3P10147 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL3P10147 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL3P10147 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL3P10147 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL3P10147 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL3P10147 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.64■□□□□ 0.09
CCL3P10147 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL3P10147 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL3P10147 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCL3P10147 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.64■□□□□ 0.09
CCL3P10147 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCL3P10147 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms