Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.17■□□□□ 0.02
UBCP0CG48 AC124947.2-201ENST00000547118 1133 ntBASIC15.17■□□□□ 0.02
UBCP0CG48 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.17■□□□□ 0.02
UBCP0CG48 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.17■□□□□ 0.02
UBCP0CG48 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UBCP0CG48 RNF126P1-202ENST00000569893 925 ntBASIC15.17■□□□□ 0.02
UBCP0CG48 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.17■□□□□ 0.02
UBCP0CG48 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.17■□□□□ 0.02
UBCP0CG48 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
UBCP0CG48 HYMAI.1-201ENST00000620949 238 ntBASIC15.17■□□□□ 0.02
UBCP0CG48 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
UBCP0CG48 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
UBCP0CG48 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UBCP0CG48 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBCP0CG48 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBCP0CG48 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBCP0CG48 AC005915.1-201ENST00000624912 2018 ntBASIC15.17■□□□□ 0.02
UBCP0CG48 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBCP0CG48 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBCP0CG48 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBCP0CG48 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.17■□□□□ 0.02
UBCP0CG48 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
UBCP0CG48 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBCP0CG48 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBCP0CG48 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UBCP0CG48 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UBCP0CG48 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.17■□□□□ 0.02
UBCP0CG48 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
UBCP0CG48 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
UBCP0CG48 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
UBCP0CG48 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
UBCP0CG48 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.16■□□□□ 0.02
UBCP0CG48 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
UBCP0CG48 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 AC005521.1-201ENST00000393351 872 ntBASIC15.16■□□□□ 0.02
UBCP0CG48 AK4P3-201ENST00000418260 669 ntBASIC15.16■□□□□ 0.02
UBCP0CG48 AC103564.2-201ENST00000432853 1299 ntBASIC15.16■□□□□ 0.02
UBCP0CG48 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.16■□□□□ 0.02
UBCP0CG48 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.16■□□□□ 0.02
UBCP0CG48 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.16■□□□□ 0.02
UBCP0CG48 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.16■□□□□ 0.02
UBCP0CG48 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.16■□□□□ 0.02
UBCP0CG48 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.16■□□□□ 0.02
UBCP0CG48 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.16■□□□□ 0.02
UBCP0CG48 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.16■□□□□ 0.02
UBCP0CG48 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBCP0CG48 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.16■□□□□ 0.02
UBCP0CG48 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.15■□□□□ 0.02
UBCP0CG48 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.15■□□□□ 0.02
UBCP0CG48 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
UBCP0CG48 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.15■□□□□ 0.02
UBCP0CG48 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.15■□□□□ 0.02
UBCP0CG48 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.15■□□□□ 0.02
UBCP0CG48 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.15■□□□□ 0.02
UBCP0CG48 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
UBCP0CG48 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms