Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.69■□□□□ 0.26
CCNYL3P0C7X3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.69■□□□□ 0.26
CCNYL3P0C7X3 AC005593.1-201ENST00000624894 515 ntBASIC16.69■□□□□ 0.26
CCNYL3P0C7X3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCNYL3P0C7X3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCNYL3P0C7X3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCNYL3P0C7X3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCNYL3P0C7X3 KRT18P55-202ENST00000578578 1546 ntBASIC16.69■□□□□ 0.26
CCNYL3P0C7X3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCNYL3P0C7X3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCNYL3P0C7X3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCNYL3P0C7X3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCNYL3P0C7X3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCNYL3P0C7X3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.69■□□□□ 0.26
CCNYL3P0C7X3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCNYL3P0C7X3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCNYL3P0C7X3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCNYL3P0C7X3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCNYL3P0C7X3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCNYL3P0C7X3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 KRT18P3-201ENST00000451602 1288 ntBASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 AC034105.1-201ENST00000563488 319 ntBASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCNYL3P0C7X3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 KRT8P47-201ENST00000604727 1398 ntBASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 AC098799.1-201ENST00000504752 800 ntBASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 RNA5SP416-201ENST00000516838 111 ntBASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 UNC93B6-202ENST00000528242 690 ntBASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 AL356488.2-201ENST00000602755 427 ntBASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 AC073592.5-201ENST00000624854 528 ntBASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.67■□□□□ 0.26
CCNYL3P0C7X3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms