Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC1P07992 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.35■□□□□ 0.05
ERCC1P07992 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.35■□□□□ 0.05
ERCC1P07992 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC1P07992 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC1P07992 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC1P07992 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
ERCC1P07992 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC1P07992 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC1P07992 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC1P07992 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC1P07992 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ERCC1P07992 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
ERCC1P07992 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC1P07992 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.34■□□□□ 0.05
ERCC1P07992 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
ERCC1P07992 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC1P07992 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC1P07992 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC1P07992 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
ERCC1P07992 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ERCC1P07992 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC1P07992 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC1P07992 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC1P07992 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC1P07992 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC1P07992 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
ERCC1P07992 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ERCC1P07992 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
ERCC1P07992 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.34■□□□□ 0.05
ERCC1P07992 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.34■□□□□ 0.05
ERCC1P07992 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
ERCC1P07992 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC1P07992 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC1P07992 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC1P07992 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
ERCC1P07992 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC1P07992 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC1P07992 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ERCC1P07992 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
ERCC1P07992 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.34■□□□□ 0.05
ERCC1P07992 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC1P07992 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ERCC1P07992 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC1P07992 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.34■□□□□ 0.05
ERCC1P07992 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ERCC1P07992 AC016396.2-201ENST00000562575 1417 ntBASIC15.34■□□□□ 0.05
ERCC1P07992 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ERCC1P07992 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.33■□□□□ 0.05
ERCC1P07992 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
ERCC1P07992 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ERCC1P07992 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.33■□□□□ 0.05
ERCC1P07992 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
ERCC1P07992 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ERCC1P07992 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
ERCC1P07992 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.33■□□□□ 0.05
ERCC1P07992 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC1P07992 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC1P07992 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.33■□□□□ 0.04
ERCC1P07992 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.33■□□□□ 0.04
ERCC1P07992 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC1P07992 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC1P07992 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC1P07992 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC1P07992 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC1P07992 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC1P07992 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC1P07992 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC1P07992 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC1P07992 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.33■□□□□ 0.04
ERCC1P07992 AL845331.1-201ENST00000424978 1190 ntBASIC15.33■□□□□ 0.04
ERCC1P07992 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.33■□□□□ 0.04
ERCC1P07992 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.33■□□□□ 0.04
ERCC1P07992 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.33■□□□□ 0.04
ERCC1P07992 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.33■□□□□ 0.04
ERCC1P07992 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC1P07992 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
ERCC1P07992 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC1P07992 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.33■□□□□ 0.04
ERCC1P07992 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.33■□□□□ 0.04
ERCC1P07992 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC1P07992 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.33■□□□□ 0.04
ERCC1P07992 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC1P07992 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.33■□□□□ 0.04
ERCC1P07992 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC1P07992 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
ERCC1P07992 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.33■□□□□ 0.04
ERCC1P07992 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
ERCC1P07992 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC1P07992 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC1P07992 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
ERCC1P07992 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC1P07992 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC1P07992 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ERCC1P07992 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC1P07992 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC1P07992 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC1P07992 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC1P07992 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.32■□□□□ 0.04
ERCC1P07992 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms