Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.28■□□□□ 0.2
CTSBP07858 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSBP07858 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CTSBP07858 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CTSBP07858 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTSBP07858 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTSBP07858 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTSBP07858 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTSBP07858 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTSBP07858 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTSBP07858 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTSBP07858 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.27■□□□□ 0.2
CTSBP07858 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CTSBP07858 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTSBP07858 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTSBP07858 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.27■□□□□ 0.2
CTSBP07858 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTSBP07858 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTSBP07858 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CTSBP07858 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTSBP07858 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTSBP07858 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTSBP07858 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTSBP07858 RPSAP43-201ENST00000402237 625 ntBASIC16.27■□□□□ 0.2
CTSBP07858 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.27■□□□□ 0.2
CTSBP07858 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.27■□□□□ 0.2
CTSBP07858 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.27■□□□□ 0.2
CTSBP07858 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.27■□□□□ 0.2
CTSBP07858 AC107918.2-201ENST00000530817 355 ntBASIC16.27■□□□□ 0.2
CTSBP07858 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.27■□□□□ 0.2
CTSBP07858 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.27■□□□□ 0.2
CTSBP07858 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.27■□□□□ 0.2
CTSBP07858 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.27■□□□□ 0.2
CTSBP07858 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.27■□□□□ 0.2
CTSBP07858 GPALPP1-207ENST00000611650 899 ntBASIC16.27■□□□□ 0.2
CTSBP07858 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.27■□□□□ 0.2
CTSBP07858 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CTSBP07858 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTSBP07858 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.27■□□□□ 0.2
CTSBP07858 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTSBP07858 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTSBP07858 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTSBP07858 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.27■□□□□ 0.19
CTSBP07858 AC016396.2-201ENST00000562575 1417 ntBASIC16.27■□□□□ 0.19
CTSBP07858 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.27■□□□□ 0.19
CTSBP07858 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTSBP07858 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.26■□□□□ 0.19
CTSBP07858 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTSBP07858 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.26■□□□□ 0.19
CTSBP07858 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTSBP07858 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTSBP07858 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CTSBP07858 BCAR1-209ENST00000546196 1340 ntBASIC16.26■□□□□ 0.19
CTSBP07858 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTSBP07858 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.26■□□□□ 0.19
CTSBP07858 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.26■□□□□ 0.19
CTSBP07858 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTSBP07858 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CTSBP07858 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTSBP07858 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTSBP07858 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTSBP07858 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTSBP07858 AC004832.2-201ENST00000426397 482 ntBASIC16.26■□□□□ 0.19
CTSBP07858 GPX1P2-201ENST00000429271 606 ntBASIC16.26■□□□□ 0.19
CTSBP07858 RHOQP3-201ENST00000437982 621 ntBASIC16.26■□□□□ 0.19
CTSBP07858 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.26■□□□□ 0.19
CTSBP07858 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.26■□□□□ 0.19
CTSBP07858 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.26■□□□□ 0.19
CTSBP07858 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CTSBP07858 AC096734.2-201ENST00000562054 433 ntBASIC16.26■□□□□ 0.19
CTSBP07858 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.26■□□□□ 0.19
CTSBP07858 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.26■□□□□ 0.19
CTSBP07858 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.26■□□□□ 0.19
CTSBP07858 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CTSBP07858 AC025580.3-201ENST00000617932 1424 ntBASIC16.26■□□□□ 0.19
CTSBP07858 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTSBP07858 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
CTSBP07858 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTSBP07858 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTSBP07858 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTSBP07858 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.26■□□□□ 0.19
CTSBP07858 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CTSBP07858 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.26■□□□□ 0.19
CTSBP07858 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.26■□□□□ 0.19
CTSBP07858 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTSBP07858 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSBP07858 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSBP07858 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.25■□□□□ 0.19
CTSBP07858 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTSBP07858 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.25■□□□□ 0.19
CTSBP07858 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.25■□□□□ 0.19
CTSBP07858 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSBP07858 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTSBP07858 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSBP07858 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSBP07858 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTSBP07858 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSBP07858 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSBP07858 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTSBP07858 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms