Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 NSUN5P1-202ENST00000421140 1535 ntBASIC13.64□□□□□ -0.23
CSN3P07498 NSUN5P2-203ENST00000457352 1529 ntBASIC13.64□□□□□ -0.23
CSN3P07498 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSN3P07498 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSN3P07498 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.64□□□□□ -0.23
CSN3P07498 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CSN3P07498 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSN3P07498 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13.63□□□□□ -0.23
CSN3P07498 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.63□□□□□ -0.23
CSN3P07498 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
CSN3P07498 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CSN3P07498 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
CSN3P07498 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.63□□□□□ -0.23
CSN3P07498 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CSN3P07498 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.63□□□□□ -0.23
CSN3P07498 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CSN3P07498 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
CSN3P07498 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CSN3P07498 SLC25A6P5-201ENST00000435663 894 ntBASIC13.63□□□□□ -0.23
CSN3P07498 MINOS1P3-201ENST00000457048 203 ntBASIC13.63□□□□□ -0.23
CSN3P07498 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CSN3P07498 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.63□□□□□ -0.23
CSN3P07498 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.63□□□□□ -0.23
CSN3P07498 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.63□□□□□ -0.23
CSN3P07498 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.63□□□□□ -0.23
CSN3P07498 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.63□□□□□ -0.23
CSN3P07498 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC13.63□□□□□ -0.23
CSN3P07498 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.63□□□□□ -0.23
CSN3P07498 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CSN3P07498 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC13.63□□□□□ -0.23
CSN3P07498 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CSN3P07498 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.63□□□□□ -0.23
CSN3P07498 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC13.63□□□□□ -0.23
CSN3P07498 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC13.63□□□□□ -0.23
CSN3P07498 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 AC011270.2-201ENST00000624293 2550 ntBASIC13.63□□□□□ -0.23
CSN3P07498 AC046158.3-201ENST00000624947 2558 ntBASIC13.63□□□□□ -0.23
CSN3P07498 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CSN3P07498 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CSN3P07498 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CSN3P07498 AC022898.2-201ENST00000616822 1312 ntBASIC13.63□□□□□ -0.23
CSN3P07498 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSN3P07498 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.63□□□□□ -0.23
CSN3P07498 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CSN3P07498 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
CSN3P07498 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.62□□□□□ -0.23
CSN3P07498 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CSN3P07498 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.62□□□□□ -0.23
CSN3P07498 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.62□□□□□ -0.23
CSN3P07498 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.62□□□□□ -0.23
CSN3P07498 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CSN3P07498 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CSN3P07498 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.62□□□□□ -0.23
CSN3P07498 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CSN3P07498 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CSN3P07498 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CSN3P07498 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.62□□□□□ -0.23
CSN3P07498 KRT126P-201ENST00000549467 1181 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms