Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RB1P06400 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RB1P06400 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RB1P06400 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.11■□□□□ 0.49
RB1P06400 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RB1P06400 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.11■□□□□ 0.49
RB1P06400 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RB1P06400 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RB1P06400 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.11■□□□□ 0.49
RB1P06400 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RB1P06400 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RB1P06400 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.11■□□□□ 0.49
RB1P06400 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
RB1P06400 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RB1P06400 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.11■□□□□ 0.49
RB1P06400 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RB1P06400 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RB1P06400 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RB1P06400 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RB1P06400 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RB1P06400 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RB1P06400 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RB1P06400 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.1■□□□□ 0.49
RB1P06400 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RB1P06400 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RB1P06400 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RB1P06400 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RB1P06400 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RB1P06400 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RB1P06400 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
RB1P06400 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.1■□□□□ 0.49
RB1P06400 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.1■□□□□ 0.49
RB1P06400 AL353732.1-201ENST00000569618 1459 ntBASIC18.1■□□□□ 0.49
RB1P06400 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RB1P06400 MIR346-201ENST00000362234 95 ntBASIC18.1■□□□□ 0.49
RB1P06400 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.1■□□□□ 0.49
RB1P06400 HCG4-201ENST00000418983 998 ntBASIC18.1■□□□□ 0.49
RB1P06400 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.1■□□□□ 0.49
RB1P06400 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.1■□□□□ 0.49
RB1P06400 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.1■□□□□ 0.49
RB1P06400 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RB1P06400 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RB1P06400 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.1■□□□□ 0.49
RB1P06400 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RB1P06400 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RB1P06400 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.09■□□□□ 0.49
RB1P06400 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.09■□□□□ 0.49
RB1P06400 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.09■□□□□ 0.49
RB1P06400 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.09■□□□□ 0.49
RB1P06400 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RB1P06400 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RB1P06400 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RB1P06400 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RB1P06400 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.09■□□□□ 0.49
RB1P06400 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RB1P06400 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RB1P06400 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RB1P06400 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RB1P06400 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RB1P06400 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RB1P06400 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RB1P06400 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RB1P06400 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RB1P06400 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
RB1P06400 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RB1P06400 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RB1P06400 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
RB1P06400 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RB1P06400 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RB1P06400 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.09■□□□□ 0.49
RB1P06400 AC241585.1-201ENST00000433527 519 ntBASIC18.09■□□□□ 0.49
RB1P06400 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.09■□□□□ 0.49
RB1P06400 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.09■□□□□ 0.49
RB1P06400 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RB1P06400 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.09■□□□□ 0.49
RB1P06400 AP005018.1-201ENST00000525475 301 ntBASIC18.09■□□□□ 0.49
RB1P06400 AP000842.3-202ENST00000569238 1080 ntBASIC18.09■□□□□ 0.49
RB1P06400 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RB1P06400 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RB1P06400 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RB1P06400 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RB1P06400 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RB1P06400 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.09■□□□□ 0.49
RB1P06400 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.09■□□□□ 0.49
RB1P06400 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RB1P06400 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.08■□□□□ 0.49
RB1P06400 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RB1P06400 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RB1P06400 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RB1P06400 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RB1P06400 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RB1P06400 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RB1P06400 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.08■□□□□ 0.49
RB1P06400 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.08■□□□□ 0.49
RB1P06400 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RB1P06400 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RB1P06400 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RB1P06400 AC092580.3-201ENST00000430932 139 ntBASIC18.08■□□□□ 0.48
RB1P06400 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.08■□□□□ 0.48
RB1P06400 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms