Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.75■□□□□ 0.11
P04436 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
P04436 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.75■□□□□ 0.11
P04436 AC064836.3-201ENST00000607928 673 ntBASIC15.75■□□□□ 0.11
P04436 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
P04436 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
P04436 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.75■□□□□ 0.11
P04436 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
P04436 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
P04436 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
P04436 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
P04436 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
P04436 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
P04436 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
P04436 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
P04436 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
P04436 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.75■□□□□ 0.11
P04436 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.75■□□□□ 0.11
P04436 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.75■□□□□ 0.11
P04436 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
P04436 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
P04436 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
P04436 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.74■□□□□ 0.11
P04436 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.74■□□□□ 0.11
P04436 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
P04436 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
P04436 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
P04436 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
P04436 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.74■□□□□ 0.11
P04436 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
P04436 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
P04436 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.74■□□□□ 0.11
P04436 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.74■□□□□ 0.11
P04436 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.74■□□□□ 0.11
P04436 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
P04436 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
P04436 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.74■□□□□ 0.11
P04436 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
P04436 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
P04436 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
P04436 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
P04436 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
P04436 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
P04436 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.74■□□□□ 0.11
P04436 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
P04436 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
P04436 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
P04436 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
P04436 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04436 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
P04436 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04436 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.73■□□□□ 0.11
P04436 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.73■□□□□ 0.11
P04436 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04436 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
P04436 NOC2LP2-201ENST00000407594 1944 ntBASIC15.73■□□□□ 0.11
P04436 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
P04436 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04436 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04436 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.73■□□□□ 0.11
P04436 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
P04436 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
P04436 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.73■□□□□ 0.11
P04436 VN2R19P-201ENST00000442399 1052 ntBASIC15.73■□□□□ 0.11
P04436 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04436 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.73■□□□□ 0.11
P04436 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.73■□□□□ 0.11
P04436 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.73■□□□□ 0.11
P04436 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.73■□□□□ 0.11
P04436 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.73■□□□□ 0.11
P04436 AC040169.1-201ENST00000565382 521 ntBASIC15.73■□□□□ 0.11
P04436 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.73■□□□□ 0.11
P04436 AC010654.1-201ENST00000615722 808 ntBASIC15.73■□□□□ 0.11
P04436 AC023511.2-201ENST00000618803 211 ntBASIC15.73■□□□□ 0.11
P04436 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.73■□□□□ 0.11
P04436 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
P04436 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.73■□□□□ 0.11
P04436 AC016396.2-201ENST00000562575 1417 ntBASIC15.73■□□□□ 0.11
P04436 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
P04436 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
P04436 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.73■□□□□ 0.11
P04436 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04436 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04436 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
P04436 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04436 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04436 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
P04436 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.73■□□□□ 0.11
P04436 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.73■□□□□ 0.11
P04436 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
P04436 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04436 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.72■□□□□ 0.11
P04436 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.72■□□□□ 0.11
P04436 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04436 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04436 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
P04436 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.72■□□□□ 0.11
P04436 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04436 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.72■□□□□ 0.11
P04436 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms