Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.92■□□□□ 0.78
COL2A1P02458 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.92■□□□□ 0.78
COL2A1P02458 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
COL2A1P02458 CYP2A7P1-201ENST00000595391 815 ntBASIC19.92■□□□□ 0.78
COL2A1P02458 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.92■□□□□ 0.78
COL2A1P02458 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL2A1P02458 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.92■□□□□ 0.78
COL2A1P02458 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.92■□□□□ 0.78
COL2A1P02458 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL2A1P02458 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.92■□□□□ 0.78
COL2A1P02458 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL2A1P02458 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL2A1P02458 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.92■□□□□ 0.78
COL2A1P02458 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.92■□□□□ 0.78
COL2A1P02458 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL2A1P02458 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL2A1P02458 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL2A1P02458 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
COL2A1P02458 COX20P2-201ENST00000452636 358 ntBASIC19.92■□□□□ 0.78
COL2A1P02458 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.92■□□□□ 0.78
COL2A1P02458 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.92■□□□□ 0.78
COL2A1P02458 AP000842.3-202ENST00000569238 1080 ntBASIC19.92■□□□□ 0.78
COL2A1P02458 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL2A1P02458 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
COL2A1P02458 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.92■□□□□ 0.78
COL2A1P02458 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.92■□□□□ 0.78
COL2A1P02458 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL2A1P02458 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL2A1P02458 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL2A1P02458 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.92■□□□□ 0.78
COL2A1P02458 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.92■□□□□ 0.78
COL2A1P02458 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL2A1P02458 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.91■□□□□ 0.78
COL2A1P02458 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL2A1P02458 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL2A1P02458 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL2A1P02458 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL2A1P02458 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.91■□□□□ 0.78
COL2A1P02458 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.91■□□□□ 0.78
COL2A1P02458 AC016027.1-202ENST00000607927 1699 ntBASIC19.91■□□□□ 0.78
COL2A1P02458 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL2A1P02458 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL2A1P02458 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL2A1P02458 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL2A1P02458 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.91■□□□□ 0.78
COL2A1P02458 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL2A1P02458 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL2A1P02458 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.91■□□□□ 0.78
COL2A1P02458 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.91■□□□□ 0.78
COL2A1P02458 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.91■□□□□ 0.78
COL2A1P02458 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.91■□□□□ 0.78
COL2A1P02458 HLA-J-202ENST00000469281 1241 ntBASIC19.91■□□□□ 0.78
COL2A1P02458 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL2A1P02458 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.91■□□□□ 0.78
COL2A1P02458 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL2A1P02458 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL2A1P02458 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL2A1P02458 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL2A1P02458 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.91■□□□□ 0.78
COL2A1P02458 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL2A1P02458 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.91■□□□□ 0.78
COL2A1P02458 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL2A1P02458 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL2A1P02458 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL2A1P02458 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL2A1P02458 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL2A1P02458 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL2A1P02458 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
COL2A1P02458 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COL2A1P02458 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL2A1P02458 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
COL2A1P02458 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL2A1P02458 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.9■□□□□ 0.78
COL2A1P02458 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.9■□□□□ 0.78
COL2A1P02458 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.9■□□□□ 0.78
COL2A1P02458 KLF2P3-201ENST00000451977 1087 ntBASIC19.9■□□□□ 0.78
COL2A1P02458 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL2A1P02458 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.9■□□□□ 0.78
COL2A1P02458 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
COL2A1P02458 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
COL2A1P02458 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.9■□□□□ 0.78
COL2A1P02458 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL2A1P02458 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL2A1P02458 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.89■□□□□ 0.78
COL2A1P02458 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL2A1P02458 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL2A1P02458 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.78
COL2A1P02458 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL2A1P02458 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL2A1P02458 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.89■□□□□ 0.77
COL2A1P02458 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL2A1P02458 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL2A1P02458 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL2A1P02458 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
COL2A1P02458 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.89■□□□□ 0.77
COL2A1P02458 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.89■□□□□ 0.77
COL2A1P02458 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.89■□□□□ 0.77
COL2A1P02458 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.89■□□□□ 0.77
COL2A1P02458 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.89■□□□□ 0.77
COL2A1P02458 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms