Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.53■□□□□ 0.56
HLA-DRAP01903 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DRAP01903 MRPL3P1-201ENST00000400109 1033 ntBASIC18.53■□□□□ 0.56
HLA-DRAP01903 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DRAP01903 ELK2BP-201ENST00000415014 1224 ntBASIC18.53■□□□□ 0.56
HLA-DRAP01903 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.53■□□□□ 0.56
HLA-DRAP01903 AC060834.1-201ENST00000443027 2032 ntBASIC18.53■□□□□ 0.56
HLA-DRAP01903 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.53■□□□□ 0.56
HLA-DRAP01903 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.53■□□□□ 0.56
HLA-DRAP01903 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.53■□□□□ 0.56
HLA-DRAP01903 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.53■□□□□ 0.56
HLA-DRAP01903 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DRAP01903 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DRAP01903 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DRAP01903 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DRAP01903 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DRAP01903 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DRAP01903 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.53■□□□□ 0.56
HLA-DRAP01903 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DRAP01903 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.52■□□□□ 0.56
HLA-DRAP01903 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
HLA-DRAP01903 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
HLA-DRAP01903 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DRAP01903 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DRAP01903 AC006504.4-201ENST00000592118 1568 ntBASIC18.52■□□□□ 0.56
HLA-DRAP01903 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DRAP01903 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DRAP01903 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DRAP01903 AC009078.2-202ENST00000463353 338 ntBASIC18.52■□□□□ 0.56
HLA-DRAP01903 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.52■□□□□ 0.56
HLA-DRAP01903 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.52■□□□□ 0.56
HLA-DRAP01903 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.52■□□□□ 0.56
HLA-DRAP01903 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.52■□□□□ 0.56
HLA-DRAP01903 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.52■□□□□ 0.56
HLA-DRAP01903 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.52■□□□□ 0.56
HLA-DRAP01903 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.52■□□□□ 0.56
HLA-DRAP01903 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.52■□□□□ 0.56
HLA-DRAP01903 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.52■□□□□ 0.56
HLA-DRAP01903 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.52■□□□□ 0.56
HLA-DRAP01903 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DRAP01903 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DRAP01903 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HLA-DRAP01903 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HLA-DRAP01903 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HLA-DRAP01903 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HLA-DRAP01903 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
HLA-DRAP01903 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HLA-DRAP01903 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HLA-DRAP01903 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DRAP01903 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.51■□□□□ 0.55
HLA-DRAP01903 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DRAP01903 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DRAP01903 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DRAP01903 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DRAP01903 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.51■□□□□ 0.55
HLA-DRAP01903 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
HLA-DRAP01903 FRMD8P1-201ENST00000440433 1524 ntBASIC18.51■□□□□ 0.55
HLA-DRAP01903 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DRAP01903 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.51■□□□□ 0.55
HLA-DRAP01903 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DRAP01903 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.51■□□□□ 0.55
HLA-DRAP01903 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.51■□□□□ 0.55
HLA-DRAP01903 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.51■□□□□ 0.55
HLA-DRAP01903 AC012640.2-201ENST00000561606 901 ntBASIC18.51■□□□□ 0.55
HLA-DRAP01903 AC006557.2-201ENST00000592985 1240 ntBASIC18.51■□□□□ 0.55
HLA-DRAP01903 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.51■□□□□ 0.55
HLA-DRAP01903 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
HLA-DRAP01903 FAM215A-202ENST00000632077 792 ntBASIC18.51■□□□□ 0.55
HLA-DRAP01903 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DRAP01903 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HLA-DRAP01903 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DRAP01903 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.51■□□□□ 0.55
HLA-DRAP01903 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DRAP01903 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DRAP01903 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DRAP01903 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DRAP01903 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HLA-DRAP01903 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DRAP01903 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HLA-DRAP01903 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.51■□□□□ 0.55
HLA-DRAP01903 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DRAP01903 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DRAP01903 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DRAP01903 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
HLA-DRAP01903 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.5■□□□□ 0.55
HLA-DRAP01903 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
HLA-DRAP01903 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.5■□□□□ 0.55
HLA-DRAP01903 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
HLA-DRAP01903 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
HLA-DRAP01903 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DRAP01903 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
HLA-DRAP01903 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DRAP01903 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DRAP01903 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.5■□□□□ 0.55
HLA-DRAP01903 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DRAP01903 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DRAP01903 KRT18P27-201ENST00000427733 1299 ntBASIC18.5■□□□□ 0.55
HLA-DRAP01903 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.5■□□□□ 0.55
HLA-DRAP01903 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DRAP01903 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms