Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LTAP01374 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LTAP01374 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LTAP01374 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LTAP01374 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LTAP01374 MIR935-201ENST00000401179 91 ntBASIC13.01□□□□□ -0.33
LTAP01374 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.01□□□□□ -0.33
LTAP01374 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC13.01□□□□□ -0.33
LTAP01374 AC034232.1-201ENST00000506026 1064 ntBASIC13.01□□□□□ -0.33
LTAP01374 IGHV3-52-201ENST00000519770 353 ntBASIC13.01□□□□□ -0.33
LTAP01374 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.01□□□□□ -0.33
LTAP01374 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.01□□□□□ -0.33
LTAP01374 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LTAP01374 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LTAP01374 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.01□□□□□ -0.33
LTAP01374 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.01□□□□□ -0.33
LTAP01374 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.01□□□□□ -0.33
LTAP01374 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LTAP01374 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.01□□□□□ -0.33
LTAP01374 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
LTAP01374 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
LTAP01374 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LTAP01374 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LTAP01374 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LTAP01374 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LTAP01374 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LTAP01374 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LTAP01374 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13□□□□□ -0.33
LTAP01374 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13□□□□□ -0.33
LTAP01374 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LTAP01374 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13□□□□□ -0.33
LTAP01374 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LTAP01374 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LTAP01374 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LTAP01374 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13□□□□□ -0.33
LTAP01374 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13□□□□□ -0.33
LTAP01374 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
LTAP01374 AL365203.3-201ENST00000609742 2057 ntBASIC13□□□□□ -0.33
LTAP01374 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13□□□□□ -0.33
LTAP01374 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LTAP01374 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LTAP01374 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LTAP01374 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
LTAP01374 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC13□□□□□ -0.33
LTAP01374 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LTAP01374 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
LTAP01374 PEX7-202ENST00000367756 680 ntTSL 3 BASIC13□□□□□ -0.33
LTAP01374 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
LTAP01374 UBE2SP1-201ENST00000450587 669 ntBASIC13□□□□□ -0.33
LTAP01374 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC13□□□□□ -0.33
LTAP01374 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
LTAP01374 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC13□□□□□ -0.33
LTAP01374 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13□□□□□ -0.33
LTAP01374 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13□□□□□ -0.33
LTAP01374 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13□□□□□ -0.33
LTAP01374 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
LTAP01374 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LTAP01374 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13□□□□□ -0.33
LTAP01374 ANKRD20A8P-203ENST00000641373 517 ntBASIC13□□□□□ -0.33
LTAP01374 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13□□□□□ -0.33
LTAP01374 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LTAP01374 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
LTAP01374 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
LTAP01374 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13□□□□□ -0.33
LTAP01374 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LTAP01374 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13□□□□□ -0.33
LTAP01374 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LTAP01374 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
LTAP01374 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13□□□□□ -0.33
LTAP01374 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LTAP01374 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LTAP01374 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LTAP01374 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC12.99□□□□□ -0.33
LTAP01374 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LTAP01374 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LTAP01374 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LTAP01374 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LTAP01374 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
LTAP01374 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LTAP01374 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.99□□□□□ -0.33
LTAP01374 TBC1D3P5-201ENST00000579401 1545 ntBASIC12.99□□□□□ -0.33
LTAP01374 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LTAP01374 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LTAP01374 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LTAP01374 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
LTAP01374 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
LTAP01374 AC097374.2-201ENST00000618617 1306 ntBASIC12.99□□□□□ -0.33
LTAP01374 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LTAP01374 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LTAP01374 INGX-201ENST00000359239 846 ntBASIC12.99□□□□□ -0.33
LTAP01374 ENSA-206ENST00000361631 725 ntTSL 2 BASIC12.99□□□□□ -0.33
LTAP01374 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LTAP01374 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LTAP01374 MIR1238-201ENST00000408483 83 ntBASIC12.99□□□□□ -0.33
LTAP01374 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LTAP01374 KRT18P48-201ENST00000434763 852 ntBASIC12.99□□□□□ -0.33
LTAP01374 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC12.99□□□□□ -0.33
LTAP01374 MTCL1P1-201ENST00000446207 792 ntBASIC12.99□□□□□ -0.33
LTAP01374 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC12.99□□□□□ -0.33
LTAP01374 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms