Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.7■□□□□ 0.42
MT-CO1P00395 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO1P00395 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
MT-CO1P00395 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO1P00395 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.7■□□□□ 0.42
MT-CO1P00395 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO1P00395 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
MT-CO1P00395 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.7■□□□□ 0.42
MT-CO1P00395 KRT18P27-201ENST00000427733 1299 ntBASIC17.7■□□□□ 0.42
MT-CO1P00395 AC098831.1-202ENST00000438821 336 ntBASIC17.7■□□□□ 0.42
MT-CO1P00395 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.7■□□□□ 0.42
MT-CO1P00395 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO1P00395 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.7■□□□□ 0.42
MT-CO1P00395 RPL13AP23-201ENST00000480739 586 ntBASIC17.7■□□□□ 0.42
MT-CO1P00395 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.7■□□□□ 0.42
MT-CO1P00395 IGHV3-22-201ENST00000520721 359 ntBASIC17.7■□□□□ 0.42
MT-CO1P00395 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO1P00395 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO1P00395 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.7■□□□□ 0.42
MT-CO1P00395 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.7■□□□□ 0.42
MT-CO1P00395 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.7■□□□□ 0.42
MT-CO1P00395 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.7■□□□□ 0.42
MT-CO1P00395 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
MT-CO1P00395 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO1P00395 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
MT-CO1P00395 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO1P00395 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
MT-CO1P00395 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO1P00395 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO1P00395 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
MT-CO1P00395 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO1P00395 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO1P00395 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO1P00395 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
MT-CO1P00395 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO1P00395 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.7■□□□□ 0.42
MT-CO1P00395 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO1P00395 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
MT-CO1P00395 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO1P00395 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO1P00395 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO1P00395 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.69■□□□□ 0.42
MT-CO1P00395 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO1P00395 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.69■□□□□ 0.42
MT-CO1P00395 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO1P00395 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO1P00395 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.69■□□□□ 0.42
MT-CO1P00395 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO1P00395 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO1P00395 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
MT-CO1P00395 AC073621.1-201ENST00000392730 636 ntBASIC17.69■□□□□ 0.42
MT-CO1P00395 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.69■□□□□ 0.42
MT-CO1P00395 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.69■□□□□ 0.42
MT-CO1P00395 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.69■□□□□ 0.42
MT-CO1P00395 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO1P00395 AC004706.3-202ENST00000621574 984 ntBASIC17.69■□□□□ 0.42
MT-CO1P00395 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.69■□□□□ 0.42
MT-CO1P00395 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO1P00395 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
MT-CO1P00395 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO1P00395 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.69■□□□□ 0.42
MT-CO1P00395 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO1P00395 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO1P00395 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.69■□□□□ 0.42
MT-CO1P00395 AC006504.4-201ENST00000592118 1568 ntBASIC17.69■□□□□ 0.42
MT-CO1P00395 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.69■□□□□ 0.42
MT-CO1P00395 AC080080.1-201ENST00000625121 2420 ntBASIC17.69■□□□□ 0.42
MT-CO1P00395 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO1P00395 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO1P00395 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
MT-CO1P00395 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO1P00395 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO1P00395 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO1P00395 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-CO1P00395 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.68■□□□□ 0.42
MT-CO1P00395 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.68■□□□□ 0.42
MT-CO1P00395 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-CO1P00395 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
MT-CO1P00395 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MT-CO1P00395 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
MT-CO1P00395 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-CO1P00395 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.68■□□□□ 0.42
MT-CO1P00395 AL135999.2-201ENST00000622438 1686 ntBASIC17.68■□□□□ 0.42
MT-CO1P00395 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-CO1P00395 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.68■□□□□ 0.42
MT-CO1P00395 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
MT-CO1P00395 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.68■□□□□ 0.42
MT-CO1P00395 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.68■□□□□ 0.42
MT-CO1P00395 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.68■□□□□ 0.42
MT-CO1P00395 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-CO1P00395 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-CO1P00395 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.68■□□□□ 0.42
MT-CO1P00395 AC020916.1-201ENST00000587762 1774 ntBASIC17.68■□□□□ 0.42
MT-CO1P00395 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MT-CO1P00395 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MT-CO1P00395 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MT-CO1P00395 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.67■□□□□ 0.42
MT-CO1P00395 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-CO1P00395 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MT-CO1P00395 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms