Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3O95983 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3O95983 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3O95983 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3O95983 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.8■□□□□ 0.76
MBD3O95983 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3O95983 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MBD3O95983 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3O95983 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.79■□□□□ 0.76
MBD3O95983 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3O95983 AC010460.3-201ENST00000511359 1579 ntBASIC19.79■□□□□ 0.76
MBD3O95983 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3O95983 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3O95983 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3O95983 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3O95983 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.79■□□□□ 0.76
MBD3O95983 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.79■□□□□ 0.76
MBD3O95983 AL136038.4-201ENST00000603606 1261 ntBASIC19.79■□□□□ 0.76
MBD3O95983 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3O95983 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
MBD3O95983 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3O95983 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3O95983 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.79■□□□□ 0.76
MBD3O95983 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.79■□□□□ 0.76
MBD3O95983 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3O95983 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3O95983 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
MBD3O95983 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3O95983 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
MBD3O95983 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3O95983 AC103702.1-201ENST00000548801 2630 ntBASIC19.79■□□□□ 0.76
MBD3O95983 AL391807.1-203ENST00000604392 2365 ntBASIC19.79■□□□□ 0.76
MBD3O95983 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3O95983 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3O95983 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.79■□□□□ 0.76
MBD3O95983 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
MBD3O95983 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3O95983 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3O95983 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3O95983 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD3O95983 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MBD3O95983 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MBD3O95983 AC132872.4-202ENST00000622924 2756 ntBASIC19.78■□□□□ 0.76
MBD3O95983 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MBD3O95983 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MBD3O95983 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MBD3O95983 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MBD3O95983 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.78■□□□□ 0.76
MBD3O95983 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MBD3O95983 HMGA1P5-201ENST00000412453 271 ntBASIC19.78■□□□□ 0.76
MBD3O95983 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.78■□□□□ 0.76
MBD3O95983 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.78■□□□□ 0.76
MBD3O95983 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.78■□□□□ 0.76
MBD3O95983 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.78■□□□□ 0.76
MBD3O95983 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MBD3O95983 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.78■□□□□ 0.76
MBD3O95983 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.78■□□□□ 0.76
MBD3O95983 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MBD3O95983 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.78■□□□□ 0.76
MBD3O95983 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MBD3O95983 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
MBD3O95983 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC19.78■□□□□ 0.76
MBD3O95983 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MBD3O95983 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
MBD3O95983 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MBD3O95983 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MBD3O95983 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MBD3O95983 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
MBD3O95983 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
MBD3O95983 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.78■□□□□ 0.76
MBD3O95983 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.78■□□□□ 0.76
MBD3O95983 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
MBD3O95983 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
MBD3O95983 FER1L4-210ENST00000615531 5998 ntBASIC19.77■□□□□ 0.76
MBD3O95983 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3O95983 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
MBD3O95983 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3O95983 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3O95983 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3O95983 AL365203.3-201ENST00000609742 2057 ntBASIC19.77■□□□□ 0.76
MBD3O95983 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3O95983 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3O95983 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3O95983 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.77■□□□□ 0.76
MBD3O95983 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3O95983 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.77■□□□□ 0.76
MBD3O95983 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3O95983 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MBD3O95983 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.77■□□□□ 0.76
MBD3O95983 FAM201B-201ENST00000458407 597 ntBASIC19.77■□□□□ 0.76
MBD3O95983 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.77■□□□□ 0.76
MBD3O95983 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
MBD3O95983 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.77■□□□□ 0.76
MBD3O95983 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.77■□□□□ 0.76
MBD3O95983 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.77■□□□□ 0.76
MBD3O95983 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.77■□□□□ 0.76
MBD3O95983 MIR4785-201ENST00000585005 73 ntBASIC19.77■□□□□ 0.76
MBD3O95983 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.77■□□□□ 0.76
MBD3O95983 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
MBD3O95983 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms