Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC22.57■■□□□ 1.2
LTN1O94822 TSSK5P-201ENST00000423978 907 ntBASIC22.57■■□□□ 1.2
LTN1O94822 STARD13-205ENST00000439831 945 ntTSL 2 BASIC22.57■■□□□ 1.2
LTN1O94822 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC22.57■■□□□ 1.2
LTN1O94822 RNA5SP421-201ENST00000516864 134 ntBASIC22.57■■□□□ 1.2
LTN1O94822 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC22.57■■□□□ 1.2
LTN1O94822 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LTN1O94822 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
LTN1O94822 CYP2A7P1-201ENST00000595391 815 ntBASIC22.57■■□□□ 1.2
LTN1O94822 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LTN1O94822 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LTN1O94822 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
LTN1O94822 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC22.57■■□□□ 1.2
LTN1O94822 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LTN1O94822 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
LTN1O94822 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
LTN1O94822 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
LTN1O94822 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LTN1O94822 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
LTN1O94822 AC097493.3-201ENST00000509725 367 ntBASIC22.56■■□□□ 1.2
LTN1O94822 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
LTN1O94822 AC012645.4-201ENST00000610691 1061 ntBASIC22.56■■□□□ 1.2
LTN1O94822 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC22.56■■□□□ 1.2
LTN1O94822 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC22.56■■□□□ 1.2
LTN1O94822 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LTN1O94822 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LTN1O94822 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
LTN1O94822 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
LTN1O94822 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LTN1O94822 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LTN1O94822 FOS-208ENST00000555686 1496 ntTSL 2 BASIC22.56■■□□□ 1.2
LTN1O94822 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LTN1O94822 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LTN1O94822 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
LTN1O94822 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
LTN1O94822 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
LTN1O94822 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
LTN1O94822 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LTN1O94822 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LTN1O94822 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LTN1O94822 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC22.55■■□□□ 1.2
LTN1O94822 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC22.55■■□□□ 1.2
LTN1O94822 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC22.55■■□□□ 1.2
LTN1O94822 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LTN1O94822 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC22.55■■□□□ 1.2
LTN1O94822 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
LTN1O94822 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
LTN1O94822 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC22.55■■□□□ 1.2
LTN1O94822 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC22.55■■□□□ 1.2
LTN1O94822 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC22.55■■□□□ 1.2
LTN1O94822 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LTN1O94822 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LTN1O94822 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
LTN1O94822 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC22.55■■□□□ 1.2
LTN1O94822 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
LTN1O94822 PXK-206ENST00000463280 2825 ntTSL 2 BASIC22.55■■□□□ 1.2
LTN1O94822 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LTN1O94822 STX3-203ENST00000529177 1571 ntTSL 2 BASIC22.55■■□□□ 1.2
LTN1O94822 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
LTN1O94822 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LTN1O94822 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC22.55■■□□□ 1.2
LTN1O94822 AC015922.1-201ENST00000421102 1152 ntBASIC22.55■■□□□ 1.2
LTN1O94822 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC22.55■■□□□ 1.2
LTN1O94822 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC22.55■■□□□ 1.2
LTN1O94822 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC22.55■■□□□ 1.2
LTN1O94822 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC22.55■■□□□ 1.2
LTN1O94822 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LTN1O94822 LINC02560-201ENST00000596379 459 ntBASIC22.55■■□□□ 1.2
LTN1O94822 SIGLEC29P-201ENST00000599873 1114 ntBASIC22.55■■□□□ 1.2
LTN1O94822 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC22.55■■□□□ 1.2
LTN1O94822 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LTN1O94822 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
LTN1O94822 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC22.55■■□□□ 1.2
LTN1O94822 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LTN1O94822 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LTN1O94822 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
LTN1O94822 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LTN1O94822 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LTN1O94822 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LTN1O94822 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
LTN1O94822 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LTN1O94822 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
LTN1O94822 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC22.54■■□□□ 1.2
LTN1O94822 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC22.54■■□□□ 1.2
LTN1O94822 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC22.54■■□□□ 1.2
LTN1O94822 AC190387.1-201ENST00000551683 408 ntBASIC22.54■■□□□ 1.2
LTN1O94822 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC22.54■■□□□ 1.2
LTN1O94822 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC22.54■■□□□ 1.2
LTN1O94822 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC22.54■■□□□ 1.2
LTN1O94822 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
LTN1O94822 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LTN1O94822 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC22.54■■□□□ 1.2
LTN1O94822 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
LTN1O94822 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
LTN1O94822 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC22.53■■□□□ 1.2
LTN1O94822 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC22.53■■□□□ 1.2
LTN1O94822 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC22.53■■□□□ 1.2
LTN1O94822 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LTN1O94822 SPDYE12P-201ENST00000618416 771 ntBASIC22.53■■□□□ 1.2
LTN1O94822 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms