Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF2O60811 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
PRAMEF2O60811 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
PRAMEF2O60811 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRAMEF2O60811 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.22■□□□□ 0.19
PRAMEF2O60811 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PRAMEF2O60811 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.22■□□□□ 0.19
PRAMEF2O60811 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF2O60811 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PRAMEF2O60811 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF2O60811 PP12613-201ENST00000424958 2230 ntBASIC16.21■□□□□ 0.19
PRAMEF2O60811 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF2O60811 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF2O60811 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
PRAMEF2O60811 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF2O60811 AC079776.2-201ENST00000641154 1609 ntBASIC16.21■□□□□ 0.19
PRAMEF2O60811 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF2O60811 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
PRAMEF2O60811 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.21■□□□□ 0.19
PRAMEF2O60811 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.21■□□□□ 0.19
PRAMEF2O60811 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
PRAMEF2O60811 SIGLEC30P-201ENST00000455569 941 ntBASIC16.21■□□□□ 0.19
PRAMEF2O60811 POLD2P1-201ENST00000511220 997 ntBASIC16.21■□□□□ 0.19
PRAMEF2O60811 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.21■□□□□ 0.19
PRAMEF2O60811 AC073592.4-201ENST00000623827 446 ntBASIC16.21■□□□□ 0.19
PRAMEF2O60811 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF2O60811 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEF2O60811 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRAMEF2O60811 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.21■□□□□ 0.19
PRAMEF2O60811 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.18
PRAMEF2O60811 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
PRAMEF2O60811 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PRAMEF2O60811 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
PRAMEF2O60811 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PRAMEF2O60811 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PRAMEF2O60811 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PRAMEF2O60811 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
PRAMEF2O60811 PMS2P7-201ENST00000506558 1336 ntBASIC16.2■□□□□ 0.18
PRAMEF2O60811 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF2O60811 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.2■□□□□ 0.18
PRAMEF2O60811 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PRAMEF2O60811 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF2O60811 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF2O60811 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF2O60811 KRT18P13-201ENST00000400056 1290 ntBASIC16.2■□□□□ 0.18
PRAMEF2O60811 MIR940-201ENST00000401276 94 ntBASIC16.2■□□□□ 0.18
PRAMEF2O60811 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF2O60811 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.2■□□□□ 0.18
PRAMEF2O60811 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.2■□□□□ 0.18
PRAMEF2O60811 AC092910.1-201ENST00000482027 1129 ntBASIC16.2■□□□□ 0.18
PRAMEF2O60811 IGHV3-22-201ENST00000520721 359 ntBASIC16.2■□□□□ 0.18
PRAMEF2O60811 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.2■□□□□ 0.18
PRAMEF2O60811 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.2■□□□□ 0.18
PRAMEF2O60811 AC145285.3-201ENST00000564603 959 ntBASIC16.2■□□□□ 0.18
PRAMEF2O60811 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.2■□□□□ 0.18
PRAMEF2O60811 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.2■□□□□ 0.18
PRAMEF2O60811 AC008735.5-201ENST00000623544 497 ntBASIC16.2■□□□□ 0.18
PRAMEF2O60811 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF2O60811 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.2■□□□□ 0.18
PRAMEF2O60811 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF2O60811 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PRAMEF2O60811 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.2■□□□□ 0.18
PRAMEF2O60811 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF2O60811 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF2O60811 AC141586.5-201ENST00000624546 2050 ntBASIC16.2■□□□□ 0.18
PRAMEF2O60811 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRAMEF2O60811 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.2■□□□□ 0.18
PRAMEF2O60811 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.19■□□□□ 0.18
PRAMEF2O60811 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF2O60811 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF2O60811 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF2O60811 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF2O60811 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.19■□□□□ 0.18
PRAMEF2O60811 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PRAMEF2O60811 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.19■□□□□ 0.18
PRAMEF2O60811 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PRAMEF2O60811 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF2O60811 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF2O60811 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.19■□□□□ 0.18
PRAMEF2O60811 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF2O60811 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PRAMEF2O60811 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.19■□□□□ 0.18
PRAMEF2O60811 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.19■□□□□ 0.18
PRAMEF2O60811 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF2O60811 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF2O60811 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.19■□□□□ 0.18
PRAMEF2O60811 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.19■□□□□ 0.18
PRAMEF2O60811 AC105339.3-201ENST00000560043 636 ntBASIC16.19■□□□□ 0.18
PRAMEF2O60811 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.19■□□□□ 0.18
PRAMEF2O60811 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF2O60811 AC107918.4-202ENST00000641623 219 ntBASIC16.19■□□□□ 0.18
PRAMEF2O60811 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PRAMEF2O60811 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF2O60811 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
PRAMEF2O60811 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PRAMEF2O60811 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF2O60811 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.19■□□□□ 0.18
PRAMEF2O60811 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF2O60811 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRAMEF2O60811 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms