Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.58■□□□□ 0.24
PRAMEF4O60810 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.58■□□□□ 0.24
PRAMEF4O60810 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.58■□□□□ 0.24
PRAMEF4O60810 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.58■□□□□ 0.24
PRAMEF4O60810 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF4O60810 DUX4L17-201ENST00000557360 1267 ntBASIC16.58■□□□□ 0.24
PRAMEF4O60810 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.58■□□□□ 0.24
PRAMEF4O60810 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.58■□□□□ 0.24
PRAMEF4O60810 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PRAMEF4O60810 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF4O60810 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF4O60810 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.58■□□□□ 0.24
PRAMEF4O60810 GPR89P-201ENST00000407924 1495 ntBASIC16.58■□□□□ 0.24
PRAMEF4O60810 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF4O60810 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF4O60810 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF4O60810 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF4O60810 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF4O60810 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF4O60810 AL356309.3-201ENST00000624132 1934 ntBASIC16.58■□□□□ 0.24
PRAMEF4O60810 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF4O60810 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.58■□□□□ 0.24
PRAMEF4O60810 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PRAMEF4O60810 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PRAMEF4O60810 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.58■□□□□ 0.24
PRAMEF4O60810 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.58■□□□□ 0.24
PRAMEF4O60810 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PRAMEF4O60810 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF4O60810 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.58■□□□□ 0.24
PRAMEF4O60810 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PRAMEF4O60810 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF4O60810 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF4O60810 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PRAMEF4O60810 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.57■□□□□ 0.24
PRAMEF4O60810 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.57■□□□□ 0.24
PRAMEF4O60810 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.57■□□□□ 0.24
PRAMEF4O60810 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PRAMEF4O60810 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.57■□□□□ 0.24
PRAMEF4O60810 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF4O60810 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF4O60810 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF4O60810 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF4O60810 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF4O60810 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF4O60810 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.57■□□□□ 0.24
PRAMEF4O60810 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.57■□□□□ 0.24
PRAMEF4O60810 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
PRAMEF4O60810 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.57■□□□□ 0.24
PRAMEF4O60810 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.57■□□□□ 0.24
PRAMEF4O60810 AC008608.2-201ENST00000606089 416 ntBASIC16.57■□□□□ 0.24
PRAMEF4O60810 AL353135.1-201ENST00000606729 504 ntBASIC16.57■□□□□ 0.24
PRAMEF4O60810 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.57■□□□□ 0.24
PRAMEF4O60810 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.57■□□□□ 0.24
PRAMEF4O60810 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF4O60810 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF4O60810 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF4O60810 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PRAMEF4O60810 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.56■□□□□ 0.24
PRAMEF4O60810 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PRAMEF4O60810 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
PRAMEF4O60810 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF4O60810 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF4O60810 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF4O60810 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.56■□□□□ 0.24
PRAMEF4O60810 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
PRAMEF4O60810 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF4O60810 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF4O60810 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF4O60810 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF4O60810 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.56■□□□□ 0.24
PRAMEF4O60810 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF4O60810 AL590787.1-201ENST00000568856 1315 ntBASIC16.56■□□□□ 0.24
PRAMEF4O60810 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF4O60810 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF4O60810 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF4O60810 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF4O60810 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PRAMEF4O60810 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.56■□□□□ 0.24
PRAMEF4O60810 DUSP5P1-201ENST00000441325 1139 ntBASIC16.56■□□□□ 0.24
PRAMEF4O60810 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PRAMEF4O60810 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.56■□□□□ 0.24
PRAMEF4O60810 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PRAMEF4O60810 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF4O60810 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.56■□□□□ 0.24
PRAMEF4O60810 IFNL4P1-201ENST00000607083 540 ntBASIC16.56■□□□□ 0.24
PRAMEF4O60810 AL139288.1-201ENST00000623748 933 ntBASIC16.56■□□□□ 0.24
PRAMEF4O60810 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PRAMEF4O60810 AL022326.1-202ENST00000641533 845 ntBASIC16.56■□□□□ 0.24
PRAMEF4O60810 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PRAMEF4O60810 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.56■□□□□ 0.24
PRAMEF4O60810 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF4O60810 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF4O60810 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF4O60810 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF4O60810 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.56■□□□□ 0.24
PRAMEF4O60810 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.56■□□□□ 0.24
PRAMEF4O60810 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.56■□□□□ 0.24
PRAMEF4O60810 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
PRAMEF4O60810 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF4O60810 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms