Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC28A2O43868 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC28A2O43868 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SLC28A2O43868 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC28A2O43868 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
SLC28A2O43868 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC28A2O43868 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC28A2O43868 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SLC28A2O43868 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC28A2O43868 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC28A2O43868 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SLC28A2O43868 AC009949.1-201ENST00000623048 1830 ntBASIC16.66■□□□□ 0.26
SLC28A2O43868 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC28A2O43868 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC28A2O43868 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC28A2O43868 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC28A2O43868 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC28A2O43868 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC28A2O43868 PRORSD1P-202ENST00000563365 2154 ntBASIC16.65■□□□□ 0.26
SLC28A2O43868 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC28A2O43868 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SLC28A2O43868 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC28A2O43868 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC28A2O43868 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC28A2O43868 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SLC28A2O43868 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SLC28A2O43868 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC28A2O43868 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC28A2O43868 SIRPAP1-201ENST00000448467 1770 ntBASIC16.65■□□□□ 0.26
SLC28A2O43868 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC28A2O43868 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC28A2O43868 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC28A2O43868 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC28A2O43868 MIR770-201ENST00000390219 98 ntBASIC16.65■□□□□ 0.26
SLC28A2O43868 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
SLC28A2O43868 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SLC28A2O43868 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC28A2O43868 AC023274.1-201ENST00000418278 595 ntBASIC16.65■□□□□ 0.26
SLC28A2O43868 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.65■□□□□ 0.26
SLC28A2O43868 AC007967.2-201ENST00000432613 625 ntBASIC16.65■□□□□ 0.26
SLC28A2O43868 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SLC28A2O43868 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC28A2O43868 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC28A2O43868 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.65■□□□□ 0.26
SLC28A2O43868 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC28A2O43868 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC28A2O43868 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SLC28A2O43868 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC28A2O43868 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC28A2O43868 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC28A2O43868 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
SLC28A2O43868 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC28A2O43868 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SLC28A2O43868 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SLC28A2O43868 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC28A2O43868 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.64■□□□□ 0.26
SLC28A2O43868 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC28A2O43868 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC28A2O43868 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC28A2O43868 AC108860.2-201ENST00000562760 2183 ntBASIC16.64■□□□□ 0.25
SLC28A2O43868 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC28A2O43868 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC28A2O43868 AL023806.1-201ENST00000603994 1649 ntBASIC16.64■□□□□ 0.25
SLC28A2O43868 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SLC28A2O43868 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC28A2O43868 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC28A2O43868 AL645939.2-201ENST00000427340 991 ntBASIC16.64■□□□□ 0.25
SLC28A2O43868 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.64■□□□□ 0.25
SLC28A2O43868 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC28A2O43868 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC28A2O43868 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.64■□□□□ 0.25
SLC28A2O43868 KRT89P-201ENST00000620027 1478 ntBASIC16.64■□□□□ 0.25
SLC28A2O43868 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC28A2O43868 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC28A2O43868 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC28A2O43868 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC28A2O43868 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SLC28A2O43868 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC28A2O43868 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC28A2O43868 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC28A2O43868 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC28A2O43868 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC28A2O43868 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC28A2O43868 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC28A2O43868 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC28A2O43868 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC28A2O43868 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC28A2O43868 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC28A2O43868 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC28A2O43868 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC28A2O43868 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC28A2O43868 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC28A2O43868 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC28A2O43868 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC28A2O43868 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC28A2O43868 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC28A2O43868 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC28A2O43868 OR7E14P-202ENST00000530490 1290 ntBASIC16.63■□□□□ 0.25
SLC28A2O43868 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC28A2O43868 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms