Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.16■□□□□ 0.5
SOX1O00570 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SOX1O00570 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.16■□□□□ 0.5
SOX1O00570 AL355994.2-201ENST00000447882 704 ntBASIC18.16■□□□□ 0.5
SOX1O00570 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.16■□□□□ 0.5
SOX1O00570 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SOX1O00570 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SOX1O00570 SPDYE18-201ENST00000510091 1050 ntBASIC18.16■□□□□ 0.5
SOX1O00570 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.16■□□□□ 0.5
SOX1O00570 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
SOX1O00570 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.16■□□□□ 0.5
SOX1O00570 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.16■□□□□ 0.5
SOX1O00570 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SOX1O00570 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
SOX1O00570 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SOX1O00570 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SOX1O00570 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SOX1O00570 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SOX1O00570 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SOX1O00570 AL161938.1-201ENST00000569833 2180 ntBASIC18.15■□□□□ 0.5
SOX1O00570 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SOX1O00570 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
SOX1O00570 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX1O00570 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX1O00570 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX1O00570 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SOX1O00570 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
SOX1O00570 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX1O00570 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX1O00570 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX1O00570 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX1O00570 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.15■□□□□ 0.5
SOX1O00570 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX1O00570 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.15■□□□□ 0.5
SOX1O00570 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SOX1O00570 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX1O00570 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
SOX1O00570 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX1O00570 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SOX1O00570 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SOX1O00570 ELK1P1-201ENST00000485699 580 ntBASIC18.15■□□□□ 0.5
SOX1O00570 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX1O00570 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.15■□□□□ 0.5
SOX1O00570 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.15■□□□□ 0.5
SOX1O00570 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.15■□□□□ 0.5
SOX1O00570 NAT9-224ENST00000583757 583 ntTSL 3 BASIC18.15■□□□□ 0.5
SOX1O00570 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SOX1O00570 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX1O00570 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.15■□□□□ 0.5
SOX1O00570 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.15■□□□□ 0.5
SOX1O00570 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.15■□□□□ 0.5
SOX1O00570 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SOX1O00570 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX1O00570 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX1O00570 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SOX1O00570 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.15■□□□□ 0.5
SOX1O00570 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX1O00570 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.15■□□□□ 0.5
SOX1O00570 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SOX1O00570 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX1O00570 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.15■□□□□ 0.5
SOX1O00570 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SOX1O00570 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SOX1O00570 AC012569.1-201ENST00000591191 1524 ntBASIC18.14■□□□□ 0.49
SOX1O00570 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOX1O00570 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SOX1O00570 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.14■□□□□ 0.49
SOX1O00570 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.14■□□□□ 0.49
SOX1O00570 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.14■□□□□ 0.49
SOX1O00570 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SOX1O00570 BOLA2P3-201ENST00000404566 256 ntBASIC18.14■□□□□ 0.49
SOX1O00570 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.14■□□□□ 0.49
SOX1O00570 AC007389.4-201ENST00000454674 793 ntBASIC18.14■□□□□ 0.49
SOX1O00570 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.14■□□□□ 0.49
SOX1O00570 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.14■□□□□ 0.49
SOX1O00570 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SOX1O00570 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.14■□□□□ 0.49
SOX1O00570 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOX1O00570 TUBB1P2-201ENST00000422712 1306 ntBASIC18.14■□□□□ 0.49
SOX1O00570 TUBB1P1-201ENST00000503144 1300 ntBASIC18.14■□□□□ 0.49
SOX1O00570 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SOX1O00570 AC093525.8-201ENST00000624099 1342 ntBASIC18.14■□□□□ 0.49
SOX1O00570 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SOX1O00570 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SOX1O00570 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
SOX1O00570 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
SOX1O00570 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.13■□□□□ 0.49
SOX1O00570 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SOX1O00570 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
SOX1O00570 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SOX1O00570 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SOX1O00570 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SOX1O00570 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SOX1O00570 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SOX1O00570 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.13■□□□□ 0.49
SOX1O00570 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SOX1O00570 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SOX1O00570 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SOX1O00570 AC005229.1-201ENST00000392885 409 ntBASIC18.13■□□□□ 0.49
SOX1O00570 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms